RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 NPAS3Q8IXF0 933 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 HUS1BQ8NHY5 278 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 IPCEF1Q8WWN9 437 aaPredicted RBP13.85□□□□□ -0.19
CPSF7-201ENST00000340437 TMEM203Q969S6 136 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 DEFB118Q96PH6 123 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 DOHHQ9BU89 302 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 OSGIN1Q9UJX0 560 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 RUVBL1Q9Y265 456 aaKnown RBP13.85□□□□□ -0.19
CPSF7-201ENST00000340437 A0A1W2PRU2 124 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 TTC36A6NLP5 189 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 TSPAN6O43657 245 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 APOA1P02647 267 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 C8GP07360 202 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 PDHA2P29803 388 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 HBA1P69905 142 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 PLPP6Q8IY26 295 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 METTL4Q8N3J2 472 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 B3GNT7Q8NFL0 401 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 ALG14Q96F25 216 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 OTUB1Q96FW1 271 aaPredicted RBP13.85□□□□□ -0.19
CPSF7-201ENST00000340437 TMEM169Q96HH4 297 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 RIOK2Q9BVS4 552 aaKnown RBP13.85□□□□□ -0.19
CPSF7-201ENST00000340437 CWH43Q9H720 699 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 NDUFAF4Q9P032 175 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 LYVE1Q9Y5Y7 322 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 A0A1W2PQ45 241 aaPredicted RBP13.85□□□□□ -0.19
CPSF7-201ENST00000340437 A0A1W2PQY0 241 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 CLCA1A8K7I4 914 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 ARHGEF33A8MVX0 844 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 NEDD8-MDP1E9PL57 170 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 WWP2O00308 870 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 SRCP12931 536 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 RECQLP46063 649 aaPredicted RBP13.85□□□□□ -0.19
CPSF7-201ENST00000340437 EPHB3P54753 998 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 SP3Q02447 781 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 SCARB2Q14108 478 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 TNFAIP8L2Q6P589 184 aaPredicted RBP13.85□□□□□ -0.19
CPSF7-201ENST00000340437 USP43Q70EL4 1123 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 FAM124AQ86V42 546 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 SCAIQ8N9R8 606 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 BTBD2Q9BX70 525 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 PCDHGB1Q9Y5G3 927 aa13.85□□□□□ -0.19
CPSF7-201ENST00000340437 KCNE1BA0A087WTH5 132 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 MRPS15P82914 257 aaKnown RBP13.84□□□□□ -0.19
CPSF7-201ENST00000340437 ZNF385BQ569K4 471 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 SLC34A3Q8N130 599 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 CYP4Z2PQ8N1L4 340 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 DNAJB8Q8NHS0 232 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 CYB5D2Q8WUJ1 264 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 UBTD2Q8WUN7 234 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 STARD8Q92502 1023 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 SCRN2Q96FV2 425 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 FAM129BQ96TA1 746 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 VN1R3Q9BXE9 311 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 MMP27Q9H306 513 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 SNTG1Q9NSN8 517 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 DNAJC27Q9NZQ0 273 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 TMPRSS11EQ9UL52 423 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 METTL15A6NJ78 407 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 DSCR3O14972 297 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 ADORA3P0DMS8 318 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 SOX3P41225 446 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 HNF4AP41235 474 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 CTSCP53634 463 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 CXCR4P61073 352 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 C11orf96Q7Z7L8 435 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 GPR65Q8IYL9 337 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 ELMOD1Q8N336 334 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 DNAJC22Q8N4W6 341 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 AQP11Q8NBQ7 271 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 CLP1Q92989 425 aaKnown RBP13.84□□□□□ -0.19
CPSF7-201ENST00000340437 SLC35B4Q969S0 331 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 C7orf34Q96L11 122 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 CDADC1Q9BWV3 514 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 FAM83DQ9H4H8 585 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 ZDHHC4Q9NPG8 344 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 C5AR2Q9P296 337 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 PSORS1C1Q9UIG5 152 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 BOLA1Q9Y3E2 137 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 ARID1BQ8NFD5 2236 aaPredicted RBP13.84□□□□□ -0.19
CPSF7-201ENST00000340437 TRBV5-4A0A0C4DH59 114 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 PDZK1P1A8MUH7 402 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 SCAMP2O15127 329 aaKnown RBP13.84□□□□□ -0.19
CPSF7-201ENST00000340437 SCN2BO60939 215 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 C1SP09871 688 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 CRYBA2P53672 197 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 RPS26P11Q5JNZ5 115 aaPredicted RBP13.84□□□□□ -0.19
CPSF7-201ENST00000340437 C10orf62Q5T681 223 aaPredicted RBP13.84□□□□□ -0.19
CPSF7-201ENST00000340437 MEX3DQ86XN8 651 aaKnown RBP13.84□□□□□ -0.19
CPSF7-201ENST00000340437 CELF5Q8N6W0 485 aaKnown RBP13.84□□□□□ -0.19
CPSF7-201ENST00000340437 ASZ1Q8WWH4 475 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 ITPKCQ96DU7 683 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 HRASLS5Q96KN8 279 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 WRAP53Q9BUR4 548 aaKnown RBP13.84□□□□□ -0.19
CPSF7-201ENST00000340437 BEX2Q9BXY8 128 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 MRPL17Q9NRX2 175 aaKnown RBP13.84□□□□□ -0.19
CPSF7-201ENST00000340437 FAM120CQ9NX05 1096 aaKnown RBP13.84□□□□□ -0.19
CPSF7-201ENST00000340437 TMED5Q9Y3A6 229 aa13.84□□□□□ -0.19
CPSF7-201ENST00000340437 PTGER1P34995 402 aa13.83□□□□□ -0.2
CPSF7-201ENST00000340437 GGT2P36268 569 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms