RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 RAB8AP61006 207 aa18.28■□□□□ 0.52
ITGA4-202ENST00000339307 USP10Q14694 798 aaKnown RBP18.28■□□□□ 0.52
ITGA4-202ENST00000339307 GALNT7Q86SF2 657 aa18.28■□□□□ 0.52
ITGA4-202ENST00000339307 TMPRSS11BQ86T26 416 aa18.28■□□□□ 0.52
ITGA4-202ENST00000339307 THOC6Q86W42 341 aaKnown RBP18.28■□□□□ 0.52
ITGA4-202ENST00000339307 OR4K1Q8NGD4 311 aa18.28■□□□□ 0.52
ITGA4-202ENST00000339307 SLCO2A1Q92959 643 aa18.28■□□□□ 0.52
ITGA4-202ENST00000339307 TRIM44Q96DX7 344 aaPredicted RBP18.28■□□□□ 0.52
ITGA4-202ENST00000339307 PTCHD1Q96NR3 888 aa18.28■□□□□ 0.52
ITGA4-202ENST00000339307 HES7Q9BYE0 225 aa18.28■□□□□ 0.52
ITGA4-202ENST00000339307 TSPAN10Q9H1Z9 355 aaPredicted RBP18.28■□□□□ 0.52
ITGA4-202ENST00000339307 CDCP1Q9H5V8 836 aa18.28■□□□□ 0.52
ITGA4-202ENST00000339307 ZFP69BQ9UJL9 534 aa18.28■□□□□ 0.52
ITGA4-202ENST00000339307 NPEPPSL1A6NEC2 478 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 URADA6NGE7 173 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 ENO4A6NNW6 628 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 GABRR3A8MPY1 467 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 PSMD12O00232 456 aaPredicted RBP18.27■□□□□ 0.52
ITGA4-202ENST00000339307 NDC80O14777 642 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 HNRNPRO43390 633 aaKnown RBP18.27■□□□□ 0.52
ITGA4-202ENST00000339307 ITGA8P53708 1063 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 NIPAL1Q6NVV3 410 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 H3F3CQ6NXT2 135 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 SYDE1Q6ZW31 735 aaPredicted RBP18.27■□□□□ 0.52
ITGA4-202ENST00000339307 FRA10AC1Q70Z53 315 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 STRA8Q7Z7C7 330 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 AFAP1L2Q8N4X5 818 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 AIF1LQ9BQI0 150 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 TRIM51Q9BSJ1 452 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 SPNS1Q9H2V7 528 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 PLAC1Q9HBJ0 212 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 IKZF3Q9UKT9 509 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 ENTPD4Q9Y227 616 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 SLC22A14Q9Y267 594 aa18.27■□□□□ 0.52
ITGA4-202ENST00000339307 A8MUA0 341 aa18.26■□□□□ 0.51
ITGA4-202ENST00000339307 CDC7O00311 574 aa18.26■□□□□ 0.51
ITGA4-202ENST00000339307 PRMT3O60678 531 aa18.26■□□□□ 0.51
ITGA4-202ENST00000339307 ESRRAP11474 423 aaPredicted RBP18.26■□□□□ 0.51
ITGA4-202ENST00000339307 IVDP26440 423 aa18.26■□□□□ 0.51
ITGA4-202ENST00000339307 SCTRP47872 440 aa18.26■□□□□ 0.51
ITGA4-202ENST00000339307 SLC26A5P58743 744 aa18.26■□□□□ 0.51
ITGA4-202ENST00000339307 ALDH6A1Q02252 535 aaKnown RBP18.26■□□□□ 0.51
ITGA4-202ENST00000339307 ZNF460Q14592 562 aa18.26■□□□□ 0.51
ITGA4-202ENST00000339307 MRGPRGQ86SM5 289 aa18.26■□□□□ 0.51
ITGA4-202ENST00000339307 NKAPQ8N5F7 415 aaKnown RBP18.26■□□□□ 0.51
ITGA4-202ENST00000339307 HORMAD2Q8N7B1 307 aa18.26■□□□□ 0.51
ITGA4-202ENST00000339307 NT5CQ8TCD5 201 aa18.26■□□□□ 0.51
ITGA4-202ENST00000339307 MAGED4Q96JG8 741 aa18.26■□□□□ 0.51
ITGA4-202ENST00000339307 RUNDC3BQ96NL0 473 aa18.26■□□□□ 0.51
ITGA4-202ENST00000339307 TEX264Q9Y6I9 313 aa18.26■□□□□ 0.51
ITGA4-202ENST00000339307 KCNE2Q9Y6J6 123 aa18.26■□□□□ 0.51
ITGA4-202ENST00000339307 FAM95CA0A1B0GW59 222 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 NPIPA5E9PKD4 350 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 WISP2O76076 250 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 MLYCDO95822 493 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 BTG2P78543 158 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 MGAT5Q09328 741 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 PDIA2Q13087 525 aaKnown RBP18.25■□□□□ 0.51
ITGA4-202ENST00000339307 MAPKAPK3Q16644 382 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 TOR1AIP1Q5JTV8 583 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 NXPE4Q6UWF7 544 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 SBSNQ6UWP8 590 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 CAPN12Q6ZSI9 719 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 KIF2BQ8N4N8 673 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 TMEM178AQ8NBL3 297 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 FAM98AQ8NCA5 519 aaKnown RBP18.25■□□□□ 0.51
ITGA4-202ENST00000339307 TRPV3Q8NET8 790 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 UTP15Q8TED0 518 aaKnown RBP18.25■□□□□ 0.51
ITGA4-202ENST00000339307 CCT6BQ92526 530 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 LRRC39Q96DD0 335 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 CCDC120Q96HB5 630 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 NPAS2Q99743 824 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 SARGQ9BW04 601 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 PELI2Q9HAT8 420 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 PRM3Q9NNZ6 103 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 LRFN1Q9P244 771 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 NPIPA1Q9UND3 350 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 PSAT1Q9Y617 370 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 MYO7BQ6PIF6 2116 aa18.25■□□□□ 0.51
ITGA4-202ENST00000339307 SLC19A2O60779 497 aa18.24■□□□□ 0.51
ITGA4-202ENST00000339307 H2AFYO75367 372 aaKnown RBP18.24■□□□□ 0.51
ITGA4-202ENST00000339307 ZNF37AP17032 561 aaPredicted RBP18.24■□□□□ 0.51
ITGA4-202ENST00000339307 MAOAP21397 527 aa18.24■□□□□ 0.51
ITGA4-202ENST00000339307 AHRP35869 848 aa18.24■□□□□ 0.51
ITGA4-202ENST00000339307 CA7P43166 264 aa18.24■□□□□ 0.51
ITGA4-202ENST00000339307 SLC12A2P55011 1212 aa18.24■□□□□ 0.51
ITGA4-202ENST00000339307 GNG11P61952 73 aa18.24■□□□□ 0.51
ITGA4-202ENST00000339307 REEP5Q00765 189 aa18.24■□□□□ 0.51
ITGA4-202ENST00000339307 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.24■□□□□ 0.51
ITGA4-202ENST00000339307 MTFR2Q6P444 385 aa18.24■□□□□ 0.51
ITGA4-202ENST00000339307 GALNTL5Q7Z4T8 443 aa18.24■□□□□ 0.51
ITGA4-202ENST00000339307 RPS19BP1Q86WX3 136 aaKnown RBP18.24■□□□□ 0.51
ITGA4-202ENST00000339307 ANKRD53Q8N9V6 530 aa18.24■□□□□ 0.51
ITGA4-202ENST00000339307 MDS2Q8NDY4 140 aa18.24■□□□□ 0.51
ITGA4-202ENST00000339307 FBXO36Q8NEA4 188 aa18.24■□□□□ 0.51
ITGA4-202ENST00000339307 ITLN2Q8WWU7 325 aaPredicted RBP18.24■□□□□ 0.51
ITGA4-202ENST00000339307 PDLIM5Q96HC4 596 aaKnown RBP18.24■□□□□ 0.51
ITGA4-202ENST00000339307 WDR83Q9BRX9 315 aaKnown RBP18.24■□□□□ 0.51
ITGA4-202ENST00000339307 KLHL31Q9H511 634 aa18.24■□□□□ 0.51
ITGA4-202ENST00000339307 RUBCNLQ9H714 662 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms