RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 DENRO43583 198 aaKnown RBP6.06□□□□□ -1.44
PRKDC-202ENST00000338368 OR1E2P47887 323 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 TMED10P49755 219 aaKnown RBP6.06□□□□□ -1.44
PRKDC-202ENST00000338368 NFE2L1Q14494 772 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 FUNDC1Q8IVP5 155 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 SLC30A8Q8IWU4 369 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 RBM18Q96H35 190 aaKnown RBP6.06□□□□□ -1.44
PRKDC-202ENST00000338368 TUBA8Q9NY65 449 aaPredicted RBP6.06□□□□□ -1.44
PRKDC-202ENST00000338368 EDARQ9UNE0 448 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 RNGTTO60942 597 aaKnown RBP6.06□□□□□ -1.44
PRKDC-202ENST00000338368 C7P10643 843 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 BLKP51451 505 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 SYT16Q17RD7 645 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 PELI3Q8N2H9 469 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 MCFD2Q8NI22 146 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 RNFT2Q96EX2 444 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 SHDQ96IW2 340 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 TVP23BQ9NYZ1 205 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 OR1A2Q9Y585 309 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 DGKBQ9Y6T7 804 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 GGT1P19440 569 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 LHCGRP22888 699 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 ARMC4Q5T2S8 1044 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 TMEM27Q9HBJ8 222 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 MAT2BQ9NZL9 334 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 CDH7Q9ULB5 785 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 SDK1Q7Z5N4 2213 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 LAMP1P11279 417 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 CDKL1Q00532 357 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 TARDBPQ13148 414 aaKnown RBP eCLIP6.06□□□□□ -1.447e-9■■■■■ 71.4
PRKDC-202ENST00000338368 TOR1AIP1Q5JTV8 583 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 SLC22A15Q8IZD6 547 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 STON2Q8WXE9 905 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 GORASP1Q9BQQ3 440 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 FZD3Q9NPG1 666 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 GMPR2Q9P2T1 348 aaKnown RBP6.06□□□□□ -1.44
PRKDC-202ENST00000338368 ATXN10Q9UBB4 475 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 PCDHB14Q9Y5E9 798 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 PI4KAP42356 2102 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 A6NHS1 94 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 ACOT8O14734 319 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 CYP17A1P05093 508 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 SDC1P18827 310 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 TACR1P25103 407 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 EOGTQ5NDL2 527 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 SLCO6A1Q86UG4 719 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 GPR135Q8IZ08 494 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 WDR92Q96MX6 357 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 OSBPL10Q9BXB5 764 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 TUBB1Q9H4B7 451 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 SLAMF8Q9P0V8 285 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 P2RX2Q9UBL9 471 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 KLHL33A6NCF5 533 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 XPNPEP2O43895 674 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 FZD6O60353 706 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 C5AR1P21730 350 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 PDHA2P29803 388 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 SHMT2P34897 504 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 BIKQ13323 160 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF846Q147U1 533 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.06□□□□□ -1.44
PRKDC-202ENST00000338368 ERI1Q8IV48 349 aaKnown RBP6.06□□□□□ -1.44
PRKDC-202ENST00000338368 BHLHE41Q9C0J9 482 aaPredicted RBP6.06□□□□□ -1.44
PRKDC-202ENST00000338368 LMAN2LQ9H0V9 348 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 TOR3AQ9H497 397 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 KLHL1Q9NR64 748 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 SMOXQ9NWM0 555 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 SSR3Q9UNL2 185 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 GRXCR1A8MXD5 290 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 TARM1B6A8C7 271 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 C9P02748 559 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 ETFAP13804 333 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 AOAHP28039 575 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 IRS1P35568 1242 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 HK3P52790 923 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 RPS21P63220 83 aaKnown RBP6.06□□□□□ -1.44
PRKDC-202ENST00000338368 RUNDC3AQ59EK9 446 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 PEX5LQ8IYB4 626 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 OR5AR1Q8NGP9 310 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 CHCHD6Q9BRQ6 235 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 RIMS3Q9UJD0 308 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 GTF2A1LQ9UNN4 478 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 LINC01553A4QN01 128 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 GRXCR2A6NFK2 248 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 RPL4P36578 427 aaKnown RBP6.06□□□□□ -1.44
PRKDC-202ENST00000338368 CCDC157Q569K6 752 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 TCEAL5Q5H9L2 206 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 PDZK1Q5T2W1 519 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 ALG1LQ6GMV1 187 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 CRNNQ9UBG3 495 aaPredicted RBP6.06□□□□□ -1.44
PRKDC-202ENST00000338368 PTPRZ1P23471 2315 aaPredicted RBP6.06□□□□□ -1.44
PRKDC-202ENST00000338368 TCRBV3S1A0A5B6 114 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 FEZF1A0PJY2 475 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 GPR37L1O60883 481 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 FEN1P39748 380 aaKnown RBP6.06□□□□□ -1.44
PRKDC-202ENST00000338368 KHKP50053 298 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 IST1P53990 364 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 CDC73Q6P1J9 531 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 TMIEQ8NEW7 156 aa6.06□□□□□ -1.44
PRKDC-202ENST00000338368 DNASE1L2Q92874 299 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms