RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 OR9A4Q8NGU2 314 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 ERGIC1Q969X5 290 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 TMEM143Q96AN5 459 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 RNFT2Q96EX2 444 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 SLC35A4Q96G79 324 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 VMP1Q96GC9 406 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 ZFYVE19Q96K21 471 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 VAT1Q99536 393 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 NAA15Q9BXJ9 866 aaKnown RBP1.4□□□□□ -2.18
LINC00643-201ENST00000334389 TRIM4Q9C037 500 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF350Q9GZX5 532 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 VPS37BQ9H9H4 285 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 CYSLTR2Q9NS75 346 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 SLC22A11Q9NSA0 550 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 RPUSD1Q9UJJ7 312 aaKnown RBP1.4□□□□□ -2.18
LINC00643-201ENST00000334389 TMEM59LQ9UK28 342 aa1.4□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF346Q9UL40 294 aaKnown RBP1.4□□□□□ -2.18
LINC00643-201ENST00000334389 INAFM1C9JVW0 142 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 PLOD2O00469 737 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 FBP2O00757 339 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 PSMD3O43242 534 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 RNASEH2AO75792 299 aaKnown RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 GCNT3O95395 438 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 STAMBPO95630 424 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 NUDT14O95848 222 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 CPP00450 1065 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 PRLP01236 227 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 THY1P04216 161 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 RLBP1P12271 317 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ITGA2P17301 1181 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 TBXA2RP21731 343 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 PCSK6P29122 969 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 SERPINB3P29508 390 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 CACNA2D1P54289 1103 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 HADHBP55084 474 aaKnown RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 CDH6P55285 790 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 TAS2R50P59544 299 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 IGBP1P78318 339 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 HHEXQ03014 270 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 SLC3A1Q07837 685 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 COX10Q12887 443 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 CUL4AQ13619 759 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ITGA9Q13797 1035 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 MOGQ16653 247 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 UGP2Q16851 508 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 NKAIN1Q4KMZ8 207 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ZC2HC1CQ53FD0 456 aaPredicted RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 SH2D4BQ5SQS7 431 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 C1orf220Q5T0J3 134 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 PWWP2BQ6NUJ5 590 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 PGM2L1Q6PCE3 622 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 KLHL17Q6TDP4 642 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 OPN5Q6U736 354 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 OLFML1Q6UWY5 402 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 C4orf22Q6V702 233 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 UNC13DQ70J99 1090 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 PTAR1Q7Z6K3 402 aaPredicted RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ANKRD37Q7Z713 158 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 GAS2L3Q86XJ1 694 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 MCATQ8IVS2 390 aaKnown RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 LRRC34Q8IZ02 419 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 PGAM4Q8N0Y7 254 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 TXLNBQ8N3L3 684 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 PLPP7Q8NBV4 271 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 MSANTD4Q8NCY6 345 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 OR9A1PQ8NGU1 263 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 MUC7Q8TAX7 377 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 DQX1Q8TE96 717 aaKnown RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 SLC37A2Q8TED4 501 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 PIH1D2Q8WWB5 315 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF799Q96GE5 643 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 TIMD4Q96H15 378 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 WDYHV1Q96HA8 205 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ATP6V0BQ99437 205 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ESYT1Q9BSJ8 1104 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 SSBP4Q9BWG4 385 aaPredicted RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 CHST8Q9H2A9 424 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 OR52A5Q9H2C5 316 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 CCSER2Q9H7U1 834 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 EDA2RQ9HAV5 297 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ARFGAP3Q9NP61 516 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 METTL5Q9NRN9 209 aaKnown RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ZDHHC3Q9NYG2 299 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 RBAKQ9NYW8 714 aaPredicted RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ADAM29Q9UKF5 820 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 TMPRSS11EQ9UL52 423 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 PCDHB10Q9UN67 800 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 U3KQK5 164 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 DMBT1Q9UGM3 2413 aaPredicted RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 CHD7Q9P2D1 2997 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 GSAPA4D1B5 854 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 MGAT4DA6NG13 374 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 NPIPB13A6NJU9 1138 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF814B7Z6K7 855 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 NPIPB4C9JG80 1138 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 MYO1FO00160 1098 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 TBL1XO60907 577 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 CNOT3O75175 753 aaKnown RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 VPS26AO75436 327 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 OR6B1O95007 311 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms