RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 C22orf39Q6P5X5 142 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 HSD11B1LQ7Z5J1 315 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 SYTL1Q8IYJ3 562 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 FAM9CQ8IZT9 166 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 CLIP4Q8N3C7 705 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 OR4A15Q8NGL6 344 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 CIDECQ96AQ7 238 aaPredicted RBP11.85□□□□□ -0.51
VPS33B-201ENST00000333371 FCRL1Q96LA6 429 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 CHCHD6Q9BRQ6 235 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 CRISPLD2Q9H0B8 497 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 RC3H2Q9HBD1 1191 aaKnown RBP11.85□□□□□ -0.51
VPS33B-201ENST00000333371 TRIM39Q9HCM9 518 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 SPATA6Q9NWH7 488 aaPredicted RBP11.85□□□□□ -0.51
VPS33B-201ENST00000333371 ZNF226Q9NYT6 803 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 RHCGQ9UBD6 479 aa11.85□□□□□ -0.51
VPS33B-201ENST00000333371 HTR3EA5X5Y0 456 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 METTL15A6NJ78 407 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 FAM227AF5H4B4 570 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 KCNK2O95069 426 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 SLC16A8O95907 504 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 IDSP22304 550 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 CTSKP43235 329 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 CTSCP53634 463 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 RPS13P62277 151 aaKnown RBP11.84□□□□□ -0.51
VPS33B-201ENST00000333371 HBA1P69905 142 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 SPIBQ01892 262 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 GANABQ14697 944 aaKnown RBP11.84□□□□□ -0.51
VPS33B-201ENST00000333371 EXOC3L2Q2M3D2 409 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 NPAS3Q8IXF0 933 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 CACTIN-AS1Q8N1I8 211 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 TCAIMQ8N3R3 496 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 DNAJC22Q8N4W6 341 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 POC5Q8NA72 575 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 OR10G2Q8NGC3 310 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 IPCEF1Q8WWN9 437 aaPredicted RBP11.84□□□□□ -0.51
VPS33B-201ENST00000333371 GTPBP3Q969Y2 492 aaKnown RBP11.84□□□□□ -0.51
VPS33B-201ENST00000333371 ECHDC3Q96DC8 303 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 ITPKCQ96DU7 683 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 DOHHQ9BU89 302 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 SH2B3Q9UQQ2 575 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 PCDH17O14917 1159 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 TGM5O43548 720 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 EFCAB14O75071 495 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 UPK1BO75841 260 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 FGF18O76093 207 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 GSTT2P0CG29 244 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 GSTT2BP0CG30 244 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 PDHA2P29803 388 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 RCVRNP35243 200 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 HOXD12P35452 270 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 GGT2P36268 569 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 MEF2AQ02078 507 aaPredicted RBP11.84□□□□□ -0.51
VPS33B-201ENST00000333371 FADDQ13158 208 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 KCNJ8Q15842 424 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 AGTRAPQ6RW13 159 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 MSANTD1Q6ZTZ1 278 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 ARMC8Q8IUR7 673 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 Q8N9G6 341 aaPredicted RBP11.84□□□□□ -0.51
VPS33B-201ENST00000333371 HUS1BQ8NHY5 278 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 ZNF675Q8TD23 568 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 C11orf24Q96F05 449 aaPredicted RBP11.84□□□□□ -0.51
VPS33B-201ENST00000333371 TCF25Q9BQ70 676 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 CDADC1Q9BWV3 514 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 GABARAPL3Q9BY60 117 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 ADPRHL2Q9NX46 363 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 MAFFQ9ULX9 164 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 RUVBL1Q9Y265 456 aaKnown RBP11.84□□□□□ -0.51
VPS33B-201ENST00000333371 FAM32AQ9Y421 112 aaKnown RBP11.84□□□□□ -0.51
VPS33B-201ENST00000333371 PCDHGB3Q9Y5G1 929 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 CHD7Q9P2D1 2997 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 MGAT4DA6NG13 374 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 FADS2P1A8MWK0 482 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 E9PQ18 207 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 TSPAN6O43657 245 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 SSX4O60224 188 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 COQ9O75208 318 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 DLGAP3O95886 979 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 TIMP1P01033 207 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 ALOX5P09917 674 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 ADORA3P0DMS8 318 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 MAPK8P45983 427 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 CSNK1DP48730 415 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 MVDP53602 400 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 VEZF1Q14119 521 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 CDKL4Q5MAI5 379 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 ZNF362Q5T0B9 420 aaPredicted RBP11.84□□□□□ -0.51
VPS33B-201ENST00000333371 TMEM53Q6P2H8 277 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 SPATC1Q76KD6 591 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 LGI4Q8N135 537 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 OR7G3Q8NG95 312 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 NFKBIDQ8NI38 313 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 MCCC1Q96RQ3 725 aaPredicted RBP11.84□□□□□ -0.51
VPS33B-201ENST00000333371 EPYCQ99645 322 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 STOX2Q9P2F5 926 aaPredicted RBP11.84□□□□□ -0.51
VPS33B-201ENST00000333371 CCL26Q9Y258 94 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 KIAA1671Q9BY89 1806 aa11.84□□□□□ -0.51
VPS33B-201ENST00000333371 KIAA0100Q14667 2235 aaKnown RBP11.83□□□□□ -0.51
VPS33B-201ENST00000333371 AGAP5A6NIR3 686 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 C6orf47O95873 294 aa11.83□□□□□ -0.52
VPS33B-201ENST00000333371 OLFM2O95897 454 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms