RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 SLC29A3Q9BZD2 475 aa8.66□□□□□ -1.02
COPB2-201ENST00000333188 TBC1D29Q9UFV1 150 aa8.66□□□□□ -1.02
COPB2-201ENST00000333188 MAGEL2Q9UJ55 1249 aa8.66□□□□□ -1.02
COPB2-201ENST00000333188 HEMK1Q9Y5R4 338 aaPredicted RBP8.66□□□□□ -1.02
COPB2-201ENST00000333188 OR2W5A6NFC9 320 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 ADAM23O75077 832 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 TCF3P15923 654 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 NDUFV2P19404 249 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 SRSF5Q13243 272 aaKnown RBP8.65□□□□□ -1.02
COPB2-201ENST00000333188 KIAA0040Q15053 153 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 DEFB134Q4QY38 66 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 ZNF385BQ569K4 471 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 TPRG1LQ5T0D9 272 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 Q6ZPB1 254 aaPredicted RBP8.65□□□□□ -1.02
COPB2-201ENST00000333188 MSRB3Q8IXL7 192 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 TSPAN14Q8NG11 270 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 OR52E1Q8NGJ3 308 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 OR5D16Q8NGK9 328 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 USP7Q93009 1102 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 ZNF514Q96K75 400 aaPredicted RBP8.65□□□□□ -1.02
COPB2-201ENST00000333188 MUS81Q96NY9 551 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 SMAD5Q99717 465 aaKnown RBP8.65□□□□□ -1.02
COPB2-201ENST00000333188 C9orf16Q9BUW7 83 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 UGT2B28Q9BY64 529 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 TRIM4Q9C037 500 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 KLHL31Q9H511 634 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 CLMPQ9H6B4 373 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 BATF3Q9NR55 127 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 PDP1Q9P0J1 537 aaPredicted RBP8.65□□□□□ -1.02
COPB2-201ENST00000333188 CACNA1HO95180 2353 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 ZW10O43264 779 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 BTN3A2P78410 334 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 PHEXP78562 749 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 TRAP1Q12931 704 aaKnown RBP8.65□□□□□ -1.02
COPB2-201ENST00000333188 GAB1Q13480 694 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 MFSD4BQ5TF39 518 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 LIPJQ5W064 366 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 GPR153Q6NV75 609 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 TRIM46Q7Z4K8 759 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 UBE2Q1Q7Z7E8 422 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 OR1E3Q8WZA6 343 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 FAM3CQ92520 227 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 GTPBP3Q969Y2 492 aaKnown RBP8.65□□□□□ -1.02
COPB2-201ENST00000333188 MRGPRX1Q96LB2 322 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 BARD1Q99728 777 aaKnown RBP8.65□□□□□ -1.02
COPB2-201ENST00000333188 C1QTNF3Q9BXJ4 246 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 FOXQ1Q9C009 403 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 SLC6A16Q9GZN6 736 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 C6orf106Q9H6K1 298 aaPredicted RBP8.65□□□□□ -1.02
COPB2-201ENST00000333188 IL21RQ9HBE5 538 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 ITM2CQ9NQX7 267 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 TEX10Q9NXF1 929 aaPredicted RBP8.65□□□□□ -1.02
COPB2-201ENST00000333188 CCL27Q9Y4X3 112 aa8.65□□□□□ -1.02
COPB2-201ENST00000333188 A0A1W2PS29 197 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 TCRBV3S1A0A5B6 114 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 ANKRD28O15084 1053 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 ZSCAN9O15535 394 aaPredicted RBP8.65□□□□□ -1.03
COPB2-201ENST00000333188 CYP7B1O75881 506 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 VIPP01282 170 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 CELA2BP08218 269 aaPredicted RBP8.65□□□□□ -1.03
COPB2-201ENST00000333188 PRR35P0CG20 571 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 MYF5P13349 255 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 ZNF26P17031 533 aaPredicted RBP8.65□□□□□ -1.03
COPB2-201ENST00000333188 ALDH4A1P30038 563 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 TIA1P31483 386 aaKnown RBP eCLIP8.65□□□□□ -1.035e-6■■■■□ 20.5
COPB2-201ENST00000333188 IGFALSP35858 605 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 ZFP36L2P47974 494 aaKnown RBP8.65□□□□□ -1.03
COPB2-201ENST00000333188 CCR8P51685 355 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 EEFSECP57772 596 aaKnown RBP8.65□□□□□ -1.03
COPB2-201ENST00000333188 ILF2Q12905 390 aaKnown RBP8.65□□□□□ -1.03
COPB2-201ENST00000333188 SP140Q13342 867 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 DUOXA1Q1HG43 343 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 DEF8Q6ZN54 512 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 Q6ZSR6 202 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 TBC1D21Q8IYX1 336 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 NRSN1Q8IZ57 195 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 SGCDQ92629 289 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 KAT2AQ92830 837 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 REPS1Q96D71 796 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 TOE1Q96GM8 510 aaKnown RBP8.65□□□□□ -1.03
COPB2-201ENST00000333188 ERVK-11Q9UQG0 969 aa8.65□□□□□ -1.03
COPB2-201ENST00000333188 FAM32AQ9Y421 112 aaKnown RBP8.65□□□□□ -1.03
COPB2-201ENST00000333188 PCM1Q15154 2024 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 OR6C74A6NCV1 312 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 H3BSA7 217 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 RPN2P04844 631 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 BCHEP06276 602 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 HSD17B1P14061 328 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 IL1RNP18510 177 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 FUT4P22083 530 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 TPMTP51580 245 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 CDH12P55289 794 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 ZNF763Q0D2J5 394 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 FCHO2Q0JRZ9 810 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 MERTKQ12866 999 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 MTSS1LQ765P7 747 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 EPHX4Q8IUS5 362 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 TDHQ8IZJ6 230 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 SHISA5Q8N114 240 aa8.64□□□□□ -1.03
COPB2-201ENST00000333188 EID3Q8N140 333 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms