RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 UBE2R2Q712K3 238 aaPredicted RBP13.9□□□□□ -0.18
SNX20-202ENST00000330943 BBS7Q8IWZ6 715 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 NAGSQ8N159 534 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 GRPEL2Q8TAA5 225 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 UBASH3BQ8TF42 649 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 TRIM63Q969Q1 353 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 MYO19Q96H55 970 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 SPATA17Q96L03 361 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 OPALINQ96PE5 141 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 GDF15Q99988 308 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 PRRG3Q9BZD7 231 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 TM6SF2Q9BZW4 377 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 ZFYVE1Q9HBF4 777 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 CCDC182A6NF36 153 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 J3KTA2 159 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 PCDH7O60245 1069 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 PRAMEF4O60810 478 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 SH3BGRLO75368 114 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 CCNB2O95067 398 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 ABCB1P08183 1280 aaPredicted RBP13.9□□□□□ -0.18
SNX20-202ENST00000330943 CKMT1AP12532 417 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 TEKQ02763 1124 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 PTGES3Q15185 160 aaKnown RBP13.9□□□□□ -0.18
SNX20-202ENST00000330943 RGNQ15493 299 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 CHRNA6Q15825 494 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 GGTA1PQ4G0N0 100 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 YIF1BQ5BJH7 314 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 PRAMEF9Q5VWM5 478 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 LYPD8Q6UX82 237 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 LRRC70Q7Z2Q7 622 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 OR4C15Q8NGM1 316 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 DUSP26Q9BV47 211 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 TAPBPLQ9BX59 468 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 SRRQ9GZT4 340 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 CHST8Q9H2A9 424 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 LHX3Q9UBR4 397 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 SLC22A14Q9Y267 594 aa13.9□□□□□ -0.18
SNX20-202ENST00000330943 EYSQ5T1H1 3165 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 ERVH48-1M5A8F1 160 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 CLDN7O95471 211 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 TRBC1P01850 177 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 POU1F1P28069 291 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 MXD1Q05195 221 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 HYAL2Q12891 473 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 ARMC12Q5T9G4 340 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 PTCHD4Q6ZW05 846 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 UBE2J2Q8N2K1 259 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 C11orf65Q8NCR3 313 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 OR8J2Q8NGG1 315 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 SLC22A4Q9H015 551 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 HHATLQ9HCP6 504 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 GLYATL1P3A0A0U1RQE8 302 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 FZD6O60353 706 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 CSF2P04141 144 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 PCGF2P35227 344 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 CRATP43155 626 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 RPS5P46782 204 aaKnown RBP13.89□□□□□ -0.19
SNX20-202ENST00000330943 PSPHP78330 225 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 RUNX1T1Q06455 604 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 SCN1BQ07699 218 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 MADCAM1Q13477 382 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 PLAG1Q6DJT9 500 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 FAM131AQ6UXB0 335 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 MACC1Q6ZN28 852 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 RFPL4BQ6ZWI9 263 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 TRIM48Q8IWZ4 208 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 FAM129BQ96TA1 746 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 MTERF1Q99551 399 aaKnown RBP13.89□□□□□ -0.19
SNX20-202ENST00000330943 TCF25Q9BQ70 676 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 SNX7Q9UNH6 387 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 TRPM7Q96QT4 1865 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 DNAH14Q0VDD8 3507 aa13.89□□□□□ -0.19
SNX20-202ENST00000330943 PCDH17O14917 1159 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 GJB5O95377 273 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 TRAPPC2P0DI81 140 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 TRAPPC2BP0DI82 140 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 RORCP51449 518 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 GPLD1P80108 840 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.88□□□□□ -0.19
SNX20-202ENST00000330943 CHIT1Q13231 466 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 IFI44LQ53G44 452 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 SERINC5Q86VE9 423 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 L3MBTL4Q8NA19 623 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 HTATIP2Q9BUP3 242 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 CLN6Q9NWW5 311 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 KCTD5Q9NXV2 234 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 DNMT3LQ9UJW3 386 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 MYO7AQ13402 2215 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 A0A1B0GVM2 712 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 NT5C1B-RDH14C9J2C7 533 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 CPNE3O75131 537 aaKnown RBP13.88□□□□□ -0.19
SNX20-202ENST00000330943 FHP07954 510 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 IRF1P10914 325 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 BPIP17213 487 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 AOAHP28039 575 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 ATP5C1P36542 298 aaKnown RBP13.88□□□□□ -0.19
SNX20-202ENST00000330943 HTR2BP41595 481 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 SEMG2Q02383 582 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 GANABQ14697 944 aaKnown RBP13.88□□□□□ -0.19
SNX20-202ENST00000330943 MORN1Q5T089 497 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms