RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ZNF282Q9UDV7 671 aaPredicted RBP6.02□□□□□ -1.45
SMG1-201ENST00000330588 PDE10AQ9Y233 779 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 PTRH2Q9Y3E5 179 aaKnown RBP6.02□□□□□ -1.45
SMG1-201ENST00000330588 IGSF10Q6WRI0 2623 aa6.02□□□□□ -1.45
SMG1-201ENST00000330588 PABPN1LA6NDY0 278 aaKnown RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 ARGFXA6NJG6 315 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 H0YGG7 62 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 H0YIG0 161 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 SOCS6O14544 535 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 TTI1O43156 1089 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 KLF4O43474 513 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 HPP00738 406 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 TUBB4AP04350 444 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 HIST1H2AGP0C0S8 130 aaPredicted RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 ZNF37AP17032 561 aaPredicted RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 HIST1H2ADP20671 130 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 IL10P22301 178 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 SLC26A3P40879 764 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 RPL21P46778 160 aaKnown RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 HNMTP50135 292 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 CDKN2DP55273 166 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 VSX2P58304 361 aaPredicted RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 ARF3P61204 181 aaPredicted RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 TBPL1P62380 186 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 SKP1P63208 163 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 MPP1Q00013 466 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 OCA2Q04671 838 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 CALCOCO2Q13137 446 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 NAB1Q13506 487 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 SLC9A5Q14940 896 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 TUBB8Q3ZCM7 444 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 HSP90B2PQ58FF3 399 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 C1QTNF12Q5T7M4 302 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 HECTD2Q5U5R9 776 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 MLIPQ5VWP3 458 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 CPZQ66K79 652 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 FRMPD2BQ6IN97 320 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 CAPN13Q6MZZ7 669 aaPredicted RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 PPP1R32Q7Z5V6 425 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 ZC3HC1Q86WB0 502 aaKnown RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 C17orf64Q86WR6 236 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 IGDCC3Q8IVU1 814 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 KLHL7Q8IXQ5 586 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 CPNE9Q8IYJ1 553 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 GALNT16Q8N428 558 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 NKAPQ8N5F7 415 aaKnown RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 TBC1D19Q8N5T2 526 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 SPATA4Q8NEY3 305 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 ABHD11Q8NFV4 315 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 OR4K1Q8NGD4 311 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 OR56A3Q8NH54 315 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 EEF1AKMT1Q8WVE0 214 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 PNPLA2Q96AD5 504 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 TM4SF19Q96DZ7 209 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 VPS39Q96JC1 886 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 HIST1H2AHQ96KK5 128 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 C10orf90Q96M02 699 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 HIST1H2AJQ99878 128 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 WDR83Q9BRX9 315 aaKnown RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 ERP44Q9BS26 406 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 H2AFJQ9BTM1 129 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 PITHD1Q9GZP4 211 aaPredicted RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 DRC3Q9H069 523 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 RAB17Q9H0T7 212 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 RHOJQ9H4E5 214 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 IRAK4Q9NWZ3 460 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 TAC3Q9UHF0 121 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 PYCARDQ9ULZ3 195 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 RUVBL2Q9Y230 463 aaKnown RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 VWA7Q9Y334 891 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 SLC22A7Q9Y694 548 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 CFAP47Q6ZTR5 3102 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 ITPR1Q14643 2758 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 PCSK5Q92824 1860 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 ZFYVE26Q68DK2 2539 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 LOC102723996A0A087X1L8 192 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 LOC105369274A0A096LPK9 316 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 LOC102723532A0A0G2JNH3 316 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 A0A0J9YVX5 310 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 SYNDIG1LA6NDD5 238 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 WISP3O95389 354 aaPredicted RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 NSA2O95478 260 aaKnown RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 ZGLP1P0C6A0 271 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 FBLP22087 321 aaKnown RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 MCM3P25205 808 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 GRK3P35626 688 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 CCL11P51671 97 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 NFKB2Q00653 900 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 POU4F1Q01851 419 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 PDIA2Q13087 525 aaKnown RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 IKZF1Q13422 519 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 CUL1Q13616 776 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 RBM20Q5T481 1227 aaKnown RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 C1orf189Q5VU69 101 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 ATG9BQ674R7 924 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 B3GNTL1Q67FW5 361 aaPredicted RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 JMJD6Q6NYC1 403 aaPredicted RBP6.01□□□□□ -1.45
SMG1-201ENST00000330588 AGTRAPQ6RW13 159 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 PAQR3Q6TCH7 311 aa6.01□□□□□ -1.45
SMG1-201ENST00000330588 SUSD1Q6UWL2 747 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms