RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 ZBTB20Q9HC78 741 aaPredicted RBP14.78□□□□□ -0.04
BRCC3-201ENST00000330045 RAPGEFL1Q9UHV5 662 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 EYSQ5T1H1 3165 aa14.78□□□□□ -0.04
BRCC3-201ENST00000330045 GNG14A0A1W2PPG7 69 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 M0R082 166 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 LEFTY2O00292 366 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 ZNF30P17039 623 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 GJA1P17302 382 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 SYN1P17600 705 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 LAG3P18627 525 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 UGT2B10P36537 528 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 CRATP43155 626 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 PPIGQ13427 754 aaKnown RBP eCLIP14.77□□□□□ -0.04
BRCC3-201ENST00000330045 MAPK11Q15759 364 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 TBCEQ15813 527 aaPredicted RBP14.77□□□□□ -0.04
BRCC3-201ENST00000330045 SYTL3Q4VX76 610 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 SPIN4Q56A73 249 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 MLIPQ5VWP3 458 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 ANGPTL8Q6UXH0 198 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 Q6ZVL8 140 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 HUS1BQ8NHY5 278 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 FOXJ1Q92949 421 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 AMBNQ9NP70 447 aa14.77□□□□□ -0.04
BRCC3-201ENST00000330045 TRAV19A0A0A6YYK7 116 aa14.77□□□□□ -0.05
BRCC3-201ENST00000330045 CLCA1A8K7I4 914 aa14.77□□□□□ -0.05
BRCC3-201ENST00000330045 RNASET2O00584 256 aaKnown RBP14.77□□□□□ -0.05
BRCC3-201ENST00000330045 CNOT3O75175 753 aaKnown RBP14.77□□□□□ -0.05
BRCC3-201ENST00000330045 OPN1SWP03999 348 aa14.77□□□□□ -0.05
BRCC3-201ENST00000330045 TNFRSF1BP20333 461 aa14.77□□□□□ -0.05
BRCC3-201ENST00000330045 CD40LGP29965 261 aa14.77□□□□□ -0.05
BRCC3-201ENST00000330045 SLC19A1P41440 591 aa14.77□□□□□ -0.05
BRCC3-201ENST00000330045 TIGD6Q17RP2 521 aa14.77□□□□□ -0.05
BRCC3-201ENST00000330045 ZNF404Q494X3 552 aa14.77□□□□□ -0.05
BRCC3-201ENST00000330045 ASTLQ6HA08 431 aaPredicted RBP14.77□□□□□ -0.05
BRCC3-201ENST00000330045 NCCRP1Q6ZVX7 275 aaPredicted RBP14.77□□□□□ -0.05
BRCC3-201ENST00000330045 SLC22A16Q86VW1 577 aa14.77□□□□□ -0.05
BRCC3-201ENST00000330045 SLC5A8Q8N695 610 aa14.77□□□□□ -0.05
BRCC3-201ENST00000330045 KIAA1958Q8N8K9 716 aa14.77□□□□□ -0.05
BRCC3-201ENST00000330045 OR10G2Q8NGC3 310 aa14.77□□□□□ -0.05
BRCC3-201ENST00000330045 PSMA8Q8TAA3 256 aa14.77□□□□□ -0.05
BRCC3-201ENST00000330045 TMEM159Q96B96 161 aa14.77□□□□□ -0.05
BRCC3-201ENST00000330045 SMG9Q9H0W8 520 aaKnown RBP14.77□□□□□ -0.05
BRCC3-201ENST00000330045 MMP27Q9H306 513 aa14.77□□□□□ -0.05
BRCC3-201ENST00000330045 SPASTQ9UBP0 616 aa14.77□□□□□ -0.05
BRCC3-201ENST00000330045 AQP9O43315 295 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 TGM5O43548 720 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 LILRB3O75022 631 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 SLC16A8O95907 504 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 CATP04040 527 aaKnown RBP14.76□□□□□ -0.05
BRCC3-201ENST00000330045 CDK1P06493 297 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 CYP2A6P11509 494 aaPredicted RBP14.76□□□□□ -0.05
BRCC3-201ENST00000330045 HLA-EP13747 358 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 VIPR1P32241 457 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 PXNP49023 591 aaPredicted RBP14.76□□□□□ -0.05
BRCC3-201ENST00000330045 CCDC103Q8IW40 242 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 RAVER1Q8IY67 606 aaKnown RBP14.76□□□□□ -0.05
BRCC3-201ENST00000330045 DNAJC22Q8N4W6 341 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 GGHQ92820 318 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 IL23AQ9NPF7 189 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 POLE4Q9NR33 117 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 A0A1W2PRU2 124 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 TSPAN6O43657 245 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 KDM1AO60341 852 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 ETFAP13804 333 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 ANXA8P13928 327 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 IMPA1P29218 277 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 TIA1P31483 386 aaKnown RBP eCLIP14.76□□□□□ -0.05
BRCC3-201ENST00000330045 ETV3P41162 512 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 CTSKP43235 329 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 BDKRB1P46663 353 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 PREPP48147 710 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 IDH2P48735 452 aaKnown RBP14.76□□□□□ -0.05
BRCC3-201ENST00000330045 TMED10P49755 219 aaKnown RBP14.76□□□□□ -0.05
BRCC3-201ENST00000330045 CASP9P55211 416 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 DCDC1P59894 354 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 RPS13P62277 151 aaKnown RBP14.76□□□□□ -0.05
BRCC3-201ENST00000330045 PCDH1Q08174 1060 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 LRRC74AQ0VAA2 488 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 COX20Q5RI15 118 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 BRAT1Q6PJG6 821 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 LILRA3Q8N6C8 439 aaPredicted RBP14.76□□□□□ -0.05
BRCC3-201ENST00000330045 OR56A3Q8NH54 315 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 OR52J3Q8NH60 311 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 TIFAQ96CG3 184 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 RIOK2Q9BVS4 552 aaKnown RBP14.76□□□□□ -0.05
BRCC3-201ENST00000330045 RLIMQ9NVW2 624 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 GPATCH2Q9NW75 528 aa14.76□□□□□ -0.05
BRCC3-201ENST00000330045 FADS2P1A8MWK0 482 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 QSOX1O00391 747 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 GADD45AP24522 165 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 EIF2DP41214 584 aaKnown RBP14.75□□□□□ -0.05
BRCC3-201ENST00000330045 OR1E2P47887 323 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 MVDP53602 400 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 SPIBQ01892 262 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 IFI44LQ53G44 452 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 ZNF385BQ569K4 471 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 ZNF852Q6ZMS4 543 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 DSG4Q86SJ6 1040 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 TMC8Q8IU68 726 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 KLHDC8AQ8IYD2 350 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms