RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 LOC100653049A0A140TA62 436 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 KRT87PA6NCN2 255 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 E7ENX8 843 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 BTN3A3O00478 584 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 MGRN1O60291 552 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 PEX11AO75192 247 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 KRT34O76011 436 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 NPPAP01160 153 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 CXCR2P25025 360 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 SERPINB1P30740 379 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 CSTF2P33240 577 aaKnown RBP eCLIP15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 CPOXP36551 454 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 TAP2Q03519 686 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 SRSF6Q13247 344 aaKnown RBP15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 ART3Q13508 389 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 ABRAXAS2Q15018 415 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 PLCL1Q15111 1095 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 NR6A1Q15406 480 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 AGKQ53H12 422 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 XKR6Q5GH73 641 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 ATG9BQ674R7 924 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 ZFAND4Q86XD8 727 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 FAM129CQ86XR2 697 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 FNDC5Q8NAU1 212 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 GLB1L3Q8NCI6 653 aaPredicted RBP15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 AGBL5Q8NDL9 886 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 OR52E1Q8NGJ3 308 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 ZFPM2Q8WW38 1151 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 SELENOMQ8WWX9 145 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 SMPDL3AQ92484 453 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 ROPN1LQ96C74 230 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 CMTM7Q96FZ5 175 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 MED8Q96G25 268 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 MAP3K3Q99759 626 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 EPB41L1Q9H4G0 881 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 THSD1Q9NS62 852 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 HRASLS2Q9NWW9 162 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 C1orf109Q9NX04 203 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 EPHA6Q9UF33 1036 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 PLAGL1Q9UM63 463 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 PPT2Q9UMR5 302 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 CCL27Q9Y4X3 112 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 B3GALT1Q9Y5Z6 326 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 SDK2Q58EX2 2172 aa15.74■□□□□ 0.11
PDLIM1-201ENST00000329399 OR5K3A6NET4 321 aa15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 NVLO15381 856 aaKnown RBP15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 ALDOCP09972 364 aaKnown RBP15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 PRPS2P11908 318 aa15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 POLR2CP19387 275 aaPredicted RBP15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 PHEXP78562 749 aa15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 GRB7Q14451 532 aa15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 KRT33BQ14525 404 aa15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 CPSF6Q16630 551 aaKnown RBP eCLIP15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 AP5B1Q2VPB7 878 aa15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 SPATS1Q496A3 300 aa15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 CACHD1Q5VU97 1274 aa15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 CYB5D1Q6P9G0 228 aa15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 MYLK4Q86YV6 388 aaPredicted RBP15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 SPACA3Q8IXA5 215 aa15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 LRRC56Q8IYG6 542 aaPredicted RBP15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 PYCR2Q96C36 320 aa15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 SIDT1Q9NXL6 827 aaKnown RBP15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 BCAP29Q9UHQ4 241 aa15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 G3BP2Q9UN86 482 aaKnown RBP15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 PCDHGA7Q9Y5G6 932 aa15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 CACNA1GO43497 2377 aa15.73■□□□□ 0.11
PDLIM1-201ENST00000329399 NRP2O60462 931 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 SLC22A3O75751 556 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 CIB2O75838 187 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 C1GALT1C1LP0DN25 315 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 NPPBP16860 134 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 TBPL1P62380 186 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 CUL3Q13618 768 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 KCNAB1Q14722 419 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 COL28A1Q2UY09 1125 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 MMEL1Q495T6 779 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 PRMT9Q6P2P2 845 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 SLCO4C1Q6ZQN7 724 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 SCUBE1Q8IWY4 988 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 ADGRF3Q8IZF5 1079 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 PGAM4Q8N0Y7 254 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 POU5F2Q8N7G0 328 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 LCN9Q8WX39 176 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 KLHL6Q8WZ60 621 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 RAB33BQ9H082 229 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 PELI2Q9HAT8 420 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 LRTM1Q9HBL6 345 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 GID8Q9NWU2 228 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 SLC39A1Q9NY26 324 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 ICKQ9UPZ9 632 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 FAM208BQ5VWN6 2430 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 PIEZO2Q9H5I5 2752 aa15.72■□□□□ 0.11
PDLIM1-201ENST00000329399 FAM234BA2RU67 622 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 FOXE1O00358 373 aaPredicted RBP15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 EFSO43281 561 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 KALRNO60229 2985 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 HRH2P25021 359 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 CPA2P48052 419 aa15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 PCBP4P57723 403 aaKnown RBP15.71■□□□□ 0.11
PDLIM1-201ENST00000329399 MC2RQ01718 297 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms