RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ESPNB1AK53 854 aa26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 SUPT3HB4E1H0 165 aa26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 CCNT2O60583 730 aaKnown RBP26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 SUPT3HO75486 399 aa26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 INHBAP08476 426 aa26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 TYK2P29597 1187 aa26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 SERPINB8P50452 374 aa26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 UTP15Q8TED0 518 aaKnown RBP26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 CREB3L4Q8TEY5 395 aa26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 KCTD4Q8WVF5 259 aa26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 SLC44A1Q8WWI5 657 aa26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 SEC16BQ96JE7 1060 aa26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 ATOH8Q96SQ7 321 aa26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 CD244Q9BZW8 370 aa26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 ZNF700Q9H0M5 742 aa26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 NT5DC2Q9H857 520 aa26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 CLK4Q9HAZ1 481 aaKnown RBP26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 COPG2Q9UBF2 871 aa26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 C19orf25Q9UFG5 118 aaPredicted RBP26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 SYCE1LA8MT33 242 aa26.08■■□□□ 1.77
ATPAF1-201ENST00000329231 HNF4AP41235 474 aa26.08■■□□□ 1.77
ATPAF1-201ENST00000329231 LRRC70Q7Z2Q7 622 aa26.08■■□□□ 1.77
ATPAF1-201ENST00000329231 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP26.08■■□□□ 1.77
ATPAF1-201ENST00000329231 CENPLQ8N0S6 344 aaPredicted RBP26.08■■□□□ 1.77
ATPAF1-201ENST00000329231 RHEBL1Q8TAI7 183 aa26.08■■□□□ 1.77
ATPAF1-201ENST00000329231 MIB2Q96AX9 1013 aa26.08■■□□□ 1.77
ATPAF1-201ENST00000329231 PEX11GQ96HA9 241 aa26.08■■□□□ 1.77
ATPAF1-201ENST00000329231 PLAAQ9Y263 795 aa26.08■■□□□ 1.77
ATPAF1-201ENST00000329231 B3GNT3Q9Y2A9 372 aa26.08■■□□□ 1.77
ATPAF1-201ENST00000329231 SCN3AQ9NY46 2000 aa26.08■■□□□ 1.77
ATPAF1-201ENST00000329231 A0A096LPK6 155 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 UBXN8O00124 270 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 ICAM2P13598 275 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 CD97P48960 835 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 SERPINB9P50453 376 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 EFNA3P52797 238 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 STXBP1P61764 594 aaKnown RBP26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 AP2B1P63010 937 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 IRF9Q00978 393 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 HYAL2Q12891 473 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 XKR6Q5GH73 641 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 KLC3Q6P597 504 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 RIPOR1Q6ZS17 1223 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 TAOK1Q7L7X3 1001 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 SHISA5Q8N114 240 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 EFCAB3Q8N7B9 438 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 OR5T3Q8NGG3 340 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 CPT1CQ8TCG5 803 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 PTCD3Q96EY7 689 aaKnown RBP26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 TUBB6Q9BUF5 446 aa26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 ZBTB20Q9HC78 741 aaPredicted RBP26.07■■□□□ 1.76
ATPAF1-201ENST00000329231 CHST10O43529 356 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 KLHL2O95198 593 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 ALDOAP04075 364 aaKnown RBP26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 SERPINA7P05543 415 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 PRR35P0CG20 571 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 SMIM10L1P0DMW3 83 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 AGTR2P50052 363 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 RAB8AP61006 207 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 ACAP2Q15057 778 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 PCOLCEQ15113 449 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 TOR1AIP1Q5JTV8 583 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 IGFL2Q6UWQ7 119 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 CPEB2Q7Z5Q1 589 aaKnown RBP26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 Q8NA96 180 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 UBTD2Q8WUN7 234 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 CCT6BQ92526 530 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 TBC1D20Q96BZ9 403 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 WDR34Q96EX3 536 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 SMIM10Q96HG1 83 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 PAFAH2Q99487 392 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 EFCAB11Q9BUY7 163 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 KLHL31Q9H511 634 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 EPS8L2Q9H6S3 715 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 LUZP4Q9P127 313 aa26.06■■□□□ 1.76
ATPAF1-201ENST00000329231 A0A087WUV0 522 aaPredicted RBP26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 ANKDD1BA6NHY2 528 aa26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 B3GALT4O96024 378 aa26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 FHP07954 510 aa26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 JAK1P23458 1154 aa26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 HPDP32754 393 aaPredicted RBP26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 MSH2P43246 934 aa26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 LAPTM5Q13571 262 aa26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 DOC2AQ14183 400 aa26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 PLEKHN1Q494U1 663 aaPredicted RBP26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 PAGE2BQ5JRK9 111 aa26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 TEX35Q5T0J7 233 aa26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 ISLR2Q6UXK2 745 aa26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 ATCAYQ86WG3 371 aa26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 PLPP5Q8NEB5 264 aa26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 LMF1Q96S06 567 aa26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 ILKAPQ9H0C8 392 aaPredicted RBP26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 OPTCQ9UBM4 332 aa26.05■■□□□ 1.76
ATPAF1-201ENST00000329231 PRAMEF4O60810 478 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 CLEC3AO75596 197 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 CDC123O75794 336 aaPredicted RBP26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 KRT38O76015 456 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 GLRBP48167 497 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 OLR1P78380 273 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 IRF8Q02556 426 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms