RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 PRPS1L1P21108 318 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 BGNP21810 368 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 PRDX6P30041 224 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 PEBP1P30086 187 aaKnown RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 TIA1P31483 386 aaKnown RBP eCLIP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 HSD17B7P56937 341 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 OCRLQ01968 901 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 BST1Q10588 318 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 SQLEQ14534 574 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 NR6A1Q15406 480 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 SPATS1Q496A3 300 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 PDCD4Q53EL6 469 aaKnown RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 ARL13AQ5H913 290 aaPredicted RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 TMEM214Q6NUQ4 689 aaKnown RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 JMJD6Q6NYC1 403 aaPredicted RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 GPALPP1Q8IXQ4 340 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 NLGN4XQ8N0W4 816 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 TMEM151AQ8N4L1 468 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 NLGN4YQ8NFZ3 816 aaPredicted RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 WDR20Q8TBZ3 569 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 TWIST2Q8WVJ9 160 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 METTL21AQ8WXB1 218 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 NCLNQ969V3 563 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 ZNF501Q96CX3 271 aaPredicted RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 C19orf60Q96EN9 201 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 IL17FQ96PD4 163 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 REXO4Q9GZR2 422 aaKnown RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 SMOC1Q9H4F8 434 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 DDX31Q9H8H2 851 aaKnown RBP4.93□□□□□ -1.62
LRIT3-201ENST00000327908 ZNF304Q9HCX3 659 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 PADI1Q9ULC6 663 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 ENTPD4Q9Y227 616 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 MAP4K5Q9Y4K4 846 aa4.93□□□□□ -1.62
LRIT3-201ENST00000327908 C15orf38-AP3S2A0A0A6YYH1 394 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 H7BY64 318 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 OR7A17O14581 309 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 ZNF749O43361 778 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 NPPAP01160 153 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 SFTPCP11686 197 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 ENDOUP21128 410 aaKnown RBP4.92□□□□□ -1.62
LRIT3-201ENST00000327908 GABRA4P48169 554 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 GABREP78334 506 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 ZNF763Q0D2J5 394 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 CCDC6Q16204 474 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 ZSWIM7Q19AV6 140 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 COQ5Q5HYK3 327 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 WASHC2DQ5SRD0 308 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 ARHGAP40Q5TG30 622 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 KCTD16Q68DU8 428 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 OR4C11Q6IEV9 310 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 ARPINQ7Z6K5 226 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 CPLX4Q7Z7G2 160 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 SYVN1Q86TM6 617 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 DDIASQ8IXT1 998 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.92□□□□□ -1.62
LRIT3-201ENST00000327908 LGI4Q8N135 537 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 TMEM132CQ8N3T6 1108 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 ZNF248Q8NDW4 579 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 PATE1Q8WXA2 126 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 PRAP1Q96NZ9 151 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 NUDT22Q9BRQ3 303 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 TRIM45Q9H8W5 580 aaPredicted RBP4.92□□□□□ -1.62
LRIT3-201ENST00000327908 C3orf14Q9HBI5 128 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 SPHK1Q9NYA1 384 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 ABI3Q9P2A4 366 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 TSR3Q9UJK0 312 aaKnown RBP4.92□□□□□ -1.62
LRIT3-201ENST00000327908 ANGPTL2Q9UKU9 493 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 PLAGL1Q9UM63 463 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 USH1CQ9Y6N9 552 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 GMNCA6NCL1 334 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 PEX12O00623 359 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 HAT1O14929 419 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 CFLARO15519 480 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 COQ9O75208 318 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 SASH3O75995 380 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 OR4F21O95013 312 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 DLGAP3O95886 979 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 AGR2O95994 175 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 BCL6P41182 706 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 WDR4P57081 412 aaKnown RBP4.92□□□□□ -1.62
LRIT3-201ENST00000327908 VSX2P58304 361 aaPredicted RBP4.92□□□□□ -1.62
LRIT3-201ENST00000327908 EXT1Q16394 746 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 SUSD1Q6UWL2 747 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 QSOX2Q6ZRP7 698 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 CDHR3Q6ZTQ4 885 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 SLC30A8Q8IWU4 369 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 TRIML2Q8N7C3 387 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 MGARPQ8TDB4 240 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 JPH3Q8WXH2 748 aaPredicted RBP4.92□□□□□ -1.62
LRIT3-201ENST00000327908 CLIP3Q96DZ5 547 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 FER1L6-AS2Q96M78 137 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 OR4K3Q96R72 315 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 ZNF446Q9NWS9 450 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 ZNF282Q9UDV7 671 aaPredicted RBP4.92□□□□□ -1.62
LRIT3-201ENST00000327908 SLC12A4Q9UP95 1085 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 ST14Q9Y5Y6 855 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 IGLV3-12A0A075B6K2 115 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 A0A0J9YVX5 310 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 OR6C76A6NM76 312 aa4.92□□□□□ -1.62
LRIT3-201ENST00000327908 CAPN14A8MX76 684 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms