RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 MGAT5Q09328 741 aa16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 CATSPEREQ5SY80 951 aa16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 SP5Q6BEB4 398 aaPredicted RBP16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 TRMT10BQ6PF06 316 aaKnown RBP16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 RPTNQ6XPR3 784 aa16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 TMEM178AQ8NBL3 297 aa16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 ELP5Q8TE02 316 aa16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 MOCOSQ96EN8 888 aa16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 SCMH1Q96GD3 660 aa16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 OLFM1Q99784 485 aa16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 ZFATQ9P243 1243 aa16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 CHMP2BQ9UQN3 213 aa16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 DYRK1BQ9Y463 629 aa16.64■□□□□ 0.25
PTPMT1-201ENST00000326656 TEP1Q99973 2627 aaKnown RBP16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 ASPDHA6ND91 283 aa16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 PRMT3O60678 531 aa16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 GUCA1CO95843 209 aa16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 SERPINA6P08185 405 aa16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 EEF1DP29692 281 aaKnown RBP16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 CA7P43166 264 aa16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 OR1C1Q15619 314 aa16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 PPP1R3AQ16821 1122 aa16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 QSOX2Q6ZRP7 698 aa16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 THOC6Q86W42 341 aaKnown RBP16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 ZC3HC1Q86WB0 502 aaKnown RBP16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 RPS19BP1Q86WX3 136 aaKnown RBP16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 CREG2Q8IUH2 290 aa16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 SHISA5Q8N114 240 aa16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 OR5T3Q8NGG3 340 aa16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 UTP15Q8TED0 518 aaKnown RBP16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 CFAP36Q96G28 342 aa16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 VPS39Q96JC1 886 aa16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 SEC16BQ96JE7 1060 aa16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 SLC6A16Q9GZN6 736 aa16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 NSMCE4AQ9NXX6 385 aa16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 MOCS1Q9NZB8 636 aa16.63■□□□□ 0.25
PTPMT1-201ENST00000326656 TRGV8A0A0C4DH27 118 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 ZNF860A6NHJ4 632 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 CCDC188H7C350 402 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 CCL21O00585 134 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 CDC123O75794 336 aaPredicted RBP16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 SEC31AO94979 1220 aaKnown RBP16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 SERPIND1P05546 499 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 ZNF888P0CJ79 500 aaPredicted RBP16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 SMIM10L1P0DMW3 83 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 RNH1P13489 461 aaKnown RBP16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 GSTM2P28161 218 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 REEP5Q00765 189 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 HP1BP3Q5SSJ5 553 aaPredicted RBP16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 FCRLBQ6BAA4 426 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 NXPE4Q6UWF7 544 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 ARMC10Q8N2F6 343 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 ZNF808Q8N4W9 903 aaPredicted RBP16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 FAM98AQ8NCA5 519 aaKnown RBP16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 ARMC2Q8NEN0 867 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 TSLPQ969D9 159 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 SMIM10Q96HG1 83 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 PTCHD1Q96NR3 888 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 POPDC3Q9HBV1 291 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 TRMT1Q9NXH9 659 aaKnown RBP16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 SLC17A6Q9P2U8 582 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 RNF14Q9UBS8 474 aa16.62■□□□□ 0.25
PTPMT1-201ENST00000326656 GABRR3A8MPY1 467 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 PSMD12O00232 456 aaPredicted RBP16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 SP1P08047 785 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 GNAZP19086 355 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 ITGA8P53708 1063 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 SLC25A25Q6KCM7 469 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 XKRXQ6PP77 449 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 ADAMTSL2Q86TH1 951 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 KLHL7Q8IXQ5 586 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 KLHDC8AQ8IYD2 350 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 AMER2Q8N7J2 671 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 ANKRD53Q8N9V6 530 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 TTLQ8NG68 377 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 ITLN2Q8WWU7 325 aaPredicted RBP16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 MARVELD3Q96A59 401 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 SIGLEC12Q96PQ1 595 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 NPAS2Q99743 824 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 WDR83Q9BRX9 315 aaKnown RBP16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 CAPS2Q9BXY5 557 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 PITHD1Q9GZP4 211 aaPredicted RBP16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 TRIM45Q9H8W5 580 aaPredicted RBP16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 CHST11Q9NPF2 352 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 PRDM9Q9NQV7 894 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 SLC22A14Q9Y267 594 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 ZNF835Q9Y2P0 537 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 OARD1Q9Y530 152 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 SAR1BQ9Y6B6 198 aa16.61■□□□□ 0.25
PTPMT1-201ENST00000326656 TCRBV16S1A1N1A0A5B0 115 aa16.6■□□□□ 0.25
PTPMT1-201ENST00000326656 PRSS44E7EML9 344 aa16.6■□□□□ 0.25
PTPMT1-201ENST00000326656 E7ESA3 106 aa16.6■□□□□ 0.25
PTPMT1-201ENST00000326656 SLC19A2O60779 497 aa16.6■□□□□ 0.25
PTPMT1-201ENST00000326656 B4GALT2O60909 372 aa16.6■□□□□ 0.25
PTPMT1-201ENST00000326656 H2AFYO75367 372 aaKnown RBP16.6■□□□□ 0.25
PTPMT1-201ENST00000326656 NEURL1O76050 574 aa16.6■□□□□ 0.25
PTPMT1-201ENST00000326656 AGAP20933 346 aa16.6■□□□□ 0.25
PTPMT1-201ENST00000326656 HPDP32754 393 aaPredicted RBP16.6■□□□□ 0.25
PTPMT1-201ENST00000326656 TRHRP34981 398 aaPredicted RBP16.6■□□□□ 0.25
PTPMT1-201ENST00000326656 PAFAH1B1P43034 410 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms