RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 CDC7O00311 574 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 AGPAT2O15120 278 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 RFPL2O75678 378 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 JUNP05412 331 aaKnown RBP7.67□□□□□ -1.18
CIITA-201ENST00000324288 EPCAMP16422 314 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 MSR1P21757 451 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 CCR8P51685 355 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 OR4D6Q8NGJ1 314 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 BORCS8Q96FH0 119 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 LYARQ9NX58 379 aaKnown RBP7.67□□□□□ -1.18
CIITA-201ENST00000324288 SPATA31A6Q5VVP1 1343 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 ITGA10O75578 1167 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 MATN1P21941 496 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 TGM4P49221 684 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 COL28A1Q2UY09 1125 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 C9orf43Q8TAL5 461 aaPredicted RBP7.67□□□□□ -1.18
CIITA-201ENST00000324288 TRMOQ9BU70 441 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 OR2B2Q9GZK3 357 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 SYNPO2LQ9H987 977 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 PRDM16Q9HAZ2 1276 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 FLRT1Q9NZU1 646 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 SLC15A5A6NIM6 579 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 LRRN3E7EW58 273 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 NPIPA5E9PKD4 350 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 B4GALT2O60909 372 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 CAP1Q01518 475 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 PIGGQ5H8A4 983 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 PCNPQ8WW12 178 aaKnown RBP7.67□□□□□ -1.18
CIITA-201ENST00000324288 SLC13A3Q8WWT9 602 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 EIF5A2Q9GZV4 153 aaKnown RBP7.67□□□□□ -1.18
CIITA-201ENST00000324288 LRRN3Q9H3W5 708 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 BRF2Q9HAW0 419 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 ENY2Q9NPA8 101 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 ATXN7L1Q9ULK2 861 aaPredicted RBP7.67□□□□□ -1.18
CIITA-201ENST00000324288 NPIPA1Q9UND3 350 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 WDR45Q9Y484 360 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 CD8B2A6NJW9 211 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 NIPSNAP2O75323 286 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 CNOT4O95628 575 aaKnown RBP7.67□□□□□ -1.18
CIITA-201ENST00000324288 ZBTB48P10074 688 aaPredicted RBP7.67□□□□□ -1.18
CIITA-201ENST00000324288 CD8BP10966 210 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 RPS14P62263 151 aaKnown RBP7.67□□□□□ -1.18
CIITA-201ENST00000324288 TSTD2Q5T7W7 516 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 CCBE1Q6UXH8 406 aaPredicted RBP7.67□□□□□ -1.18
CIITA-201ENST00000324288 MON1BQ7L1V2 547 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 ZNF550Q7Z398 422 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 Q8N402 240 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 FKTNO75072 461 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 PRNPP04156 253 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 C8BP07358 591 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 C8orf89P0DMQ9 161 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 CHRM1P11229 460 aaPredicted RBP7.67□□□□□ -1.18
CIITA-201ENST00000324288 LMO2P25791 158 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 CDH11P55287 796 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 CARD17Q5XLA6 110 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 ZNF662Q6ZS27 426 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 PLPPR4Q7Z2D5 763 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 MARVELD2Q8N4S9 558 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 JPH3Q8WXH2 748 aaPredicted RBP7.67□□□□□ -1.18
CIITA-201ENST00000324288 CREB3L1Q96BA8 519 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 TMEM41AQ96HV5 264 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 DGAT2Q96PD7 388 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 GMEB2Q9UKD1 530 aa7.67□□□□□ -1.18
CIITA-201ENST00000324288 NFATC1O95644 943 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 CXCR1P25024 350 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 SLBPQ14493 270 aaKnown RBP eCLIP7.66□□□□□ -1.18
CIITA-201ENST00000324288 ALG10Q5BKT4 473 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 GDF6Q6KF10 455 aaPredicted RBP7.66□□□□□ -1.18
CIITA-201ENST00000324288 ACBD4Q8NC06 268 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 TOR1AIP2Q8NFQ8 470 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 KCNA7Q96RP8 456 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 GLOD5A6NK44 160 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 TBX18O95935 607 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 ALPIP09923 528 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 SPATA31C1P0DKV0 1188 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 KCNC4Q03721 635 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 MFSD13AQ14CX5 517 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 TEAD4Q15561 434 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 SCAMP5Q8TAC9 235 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 CD99L2Q8TCZ2 262 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 NKD2Q969F2 451 aaPredicted RBP7.66□□□□□ -1.18
CIITA-201ENST00000324288 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.66□□□□□ -1.18
CIITA-201ENST00000324288 MYEF2Q9P2K5 600 aaKnown RBP7.66□□□□□ -1.18
CIITA-201ENST00000324288 SNAP29O95721 258 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 RAB36O95755 333 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 ANXA3P12429 323 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 CBR1P16152 277 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 FADDQ13158 208 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 ASRGL1Q7L266 308 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 GJD3Q8N144 294 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 STYXQ8WUJ0 223 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 ROPN1LQ96C74 230 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 TCEAL4Q96EI5 215 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 TMEM150CB9EJG8 249 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 SIX3O95343 332 aaPredicted RBP7.66□□□□□ -1.18
CIITA-201ENST00000324288 TGFB1P01137 390 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 MSS51Q4VC12 460 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 DPY19L3Q6ZPD9 716 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 DNAAF1Q8NEP3 725 aa7.66□□□□□ -1.18
CIITA-201ENST00000324288 GEMIN6Q8WXD5 167 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms