RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 INMTO95050 263 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 PAPLNO95428 1278 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 C6P13671 934 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 PTX3P26022 381 aaPredicted RBP21.46■■□□□ 1.03
PNKP-201ENST00000322344 C21orf59P57076 290 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 CSNK2BP67870 215 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 MVKQ03426 396 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 NPRL3Q12980 569 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 FADDQ13158 208 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 FNDC3BQ53EP0 1204 aaKnown RBP21.46■■□□□ 1.03
PNKP-201ENST00000322344 GCNT6Q5T4J0 391 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 METTL4Q8N3J2 472 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 C16orf78Q8WTQ4 265 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 PPP1R14BQ96C90 147 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 SAMD11Q96NU1 681 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 ZNF347Q96SE7 839 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 GABARAPL3Q9BY60 117 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 ERVK-18Q9QC07 812 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 SH2B3Q9UQQ2 575 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 ADAMDEC1O15204 470 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 BCAS1O75363 584 aaPredicted RBP21.46■■□□□ 1.03
PNKP-201ENST00000322344 TNFRSF21O75509 655 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 POP7O75817 140 aaKnown RBP21.46■■□□□ 1.03
PNKP-201ENST00000322344 CRATP43155 626 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 MVDP53602 400 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 HBA1P69905 142 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 PPIGQ13427 754 aaKnown RBP eCLIP21.46■■□□□ 1.035e-7■■■■□ 22.9
PNKP-201ENST00000322344 C9orf64Q5T6V5 341 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 FAM71E1Q6IPT2 247 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 ETFBKMTQ8IXQ9 262 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 OXR1Q8N573 874 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 OR2L2Q8NH16 312 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 IPCEF1Q8WWN9 437 aaPredicted RBP21.46■■□□□ 1.03
PNKP-201ENST00000322344 MAL2Q969L2 176 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 SLC35A5Q9BS91 424 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 TMEM38AQ9H6F2 299 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 DPP7Q9UHL4 492 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 PCDHGA10Q9Y5H3 936 aa21.46■■□□□ 1.03
PNKP-201ENST00000322344 hCG_2014768A0A024R1R8 64 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 K7ESM1 405 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 ADRB3P13945 408 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 ACADLP28330 430 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 C2orf80Q0P641 193 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 PROX2Q3B8N5 592 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 TMEM52BQ4KMG9 183 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 TRIM40Q6P9F5 258 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 Q6ZNX1 250 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 IKBIPQ70UQ0 350 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 TRUB1Q8WWH5 349 aaKnown RBP21.45■■□□□ 1.02
PNKP-201ENST00000322344 NXPE3Q969Y0 559 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 TBCCD1Q9NVR7 557 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 PCDH10Q9P2E7 1040 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 RAPGEFL1Q9UHV5 662 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 RWDD3Q9Y3V2 267 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 GCM2O75603 506 aaPredicted RBP21.45■■□□□ 1.02
PNKP-201ENST00000322344 GABARAPO95166 117 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 C6orf47O95873 294 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 TGFB1P01137 390 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 RRM2P31350 389 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 METAP1P53582 386 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 CAMK2GQ13555 558 aaPredicted RBP21.45■■□□□ 1.02
PNKP-201ENST00000322344 ELAVL3Q14576 367 aaKnown RBP21.45■■□□□ 1.02
PNKP-201ENST00000322344 IFI44LQ53G44 452 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 ZNF697Q5TEC3 545 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 ANGPTL8Q6UXH0 198 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 CCDC80Q76M96 950 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 OR4K1Q8NGD4 311 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 OR51B5Q9H339 312 aa21.45■■□□□ 1.02
PNKP-201ENST00000322344 TMEM229AB2RXF0 380 aa21.44■■□□□ 1.02
PNKP-201ENST00000322344 PRRT4C9JH25 899 aa21.44■■□□□ 1.02
PNKP-201ENST00000322344 RGS10O43665 173 aa21.44■■□□□ 1.02
PNKP-201ENST00000322344 FAM20BO75063 409 aa21.44■■□□□ 1.02
PNKP-201ENST00000322344 AQP1P29972 269 aa21.44■■□□□ 1.02
PNKP-201ENST00000322344 BMXP51813 675 aa21.44■■□□□ 1.02
PNKP-201ENST00000322344 RPP38P78345 283 aaKnown RBP21.44■■□□□ 1.02
PNKP-201ENST00000322344 EIF4HQ15056 248 aaKnown RBP21.44■■□□□ 1.02
PNKP-201ENST00000322344 LCTLQ6UWM7 567 aa21.44■■□□□ 1.02
PNKP-201ENST00000322344 ZNF547Q8IVP9 402 aa21.44■■□□□ 1.02
PNKP-201ENST00000322344 WDR48Q8TAF3 677 aa21.44■■□□□ 1.02
PNKP-201ENST00000322344 SPPL2AQ8TCT8 520 aa21.44■■□□□ 1.02
PNKP-201ENST00000322344 GIPC3Q8TF64 312 aa21.44■■□□□ 1.02
PNKP-201ENST00000322344 ZNF707Q96C28 371 aaPredicted RBP21.44■■□□□ 1.02
PNKP-201ENST00000322344 PLEKHA8Q96JA3 519 aa21.44■■□□□ 1.02
PNKP-201ENST00000322344 GPATCH2Q9NW75 528 aa21.44■■□□□ 1.02
PNKP-201ENST00000322344 CXXC1Q9P0U4 656 aaPredicted RBP21.44■■□□□ 1.02
PNKP-201ENST00000322344 TLL1O43897 1013 aa21.43■■□□□ 1.02
PNKP-201ENST00000322344 MMP20O60882 483 aa21.43■■□□□ 1.02
PNKP-201ENST00000322344 NFATC1O95644 943 aa21.43■■□□□ 1.02
PNKP-201ENST00000322344 RB1P06400 928 aa21.43■■□□□ 1.02
PNKP-201ENST00000322344 ETFAP13804 333 aa21.43■■□□□ 1.02
PNKP-201ENST00000322344 ZNF12P17014 697 aa21.43■■□□□ 1.02
PNKP-201ENST00000322344 ACVR2AP27037 513 aa21.43■■□□□ 1.02
PNKP-201ENST00000322344 HTRA3P83110 453 aa21.43■■□□□ 1.02
PNKP-201ENST00000322344 AQP6Q13520 282 aa21.43■■□□□ 1.02
PNKP-201ENST00000322344 SCARB2Q14108 478 aa21.43■■□□□ 1.02
PNKP-201ENST00000322344 SPCS2Q15005 226 aa21.43■■□□□ 1.02
PNKP-201ENST00000322344 CTF1Q16619 201 aa21.43■■□□□ 1.02
PNKP-201ENST00000322344 PRAMEF14Q5SWL7 426 aa21.43■■□□□ 1.02
PNKP-201ENST00000322344 SYT6Q5T7P8 510 aaPredicted RBP21.43■■□□□ 1.02
PNKP-201ENST00000322344 PRAMEF13Q5VWM6 474 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms