RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 NAALAD2Q9Y3Q0 740 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 CACNA1CQ13936 2221 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 SCN3AQ9NY46 2000 aa13.37□□□□□ -0.27
RPP40-201ENST00000319533 FEZF1A0PJY2 475 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 GABRR3A8MPY1 467 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 NPIPA5E9PKD4 350 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 NDC80O14777 642 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 SLC16A5O15375 505 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 ASNA1O43681 348 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 HAUS5O94927 633 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 TTC4O95801 387 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 C8GP07360 202 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 SNRPB2P08579 225 aaKnown RBP13.36□□□□□ -0.27
RPP40-201ENST00000319533 NPPBP16860 134 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 SSTR2P30874 369 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 KIR3DL1P43629 444 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 SLC26A5P58743 744 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 MPP1Q00013 466 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 SP140Q13342 867 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 HERC3Q15034 1050 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 LCE2DQ5TA82 110 aaPredicted RBP13.36□□□□□ -0.27
RPP40-201ENST00000319533 SLC25A25Q6KCM7 469 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 AGTRAPQ6RW13 159 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 LCTLQ6UWM7 567 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 GALNTL5Q7Z4T8 443 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 C17orf64Q86WR6 236 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 PDIK1LQ8N165 341 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 AGGF1Q8N302 714 aaeCLIP13.36□□□□□ -0.27
RPP40-201ENST00000319533 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.36□□□□□ -0.27
RPP40-201ENST00000319533 ABHD11Q8NFV4 315 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 OR4K1Q8NGD4 311 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 ZCCHC10Q8TBK6 192 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 C14orf79Q96F83 325 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 SIGLEC10Q96LC7 697 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 OLFM1Q99784 485 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 SPOCK3Q9BQ16 436 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 TREX2Q9BQ50 279 aaPredicted RBP13.36□□□□□ -0.27
RPP40-201ENST00000319533 FAM167BQ9BTA0 163 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 PARVBQ9HBI1 364 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 GPAMQ9HCL2 828 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 ANKRD10Q9NXR5 420 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 NPIPA1Q9UND3 350 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 GTF3C1Q12789 2109 aa13.36□□□□□ -0.27
RPP40-201ENST00000319533 FAM227AF5H4B4 570 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 ADAM10O14672 748 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 GALR3O60755 368 aaPredicted RBP13.35□□□□□ -0.27
RPP40-201ENST00000319533 FHP07954 510 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 SLC35G6P0C7Q6 338 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 GRK3P35626 688 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 ACTN3Q08043 901 aaPredicted RBP13.35□□□□□ -0.27
RPP40-201ENST00000319533 DHX9Q08211 1270 aaKnown RBP13.35□□□□□ -0.27
RPP40-201ENST00000319533 NAE1Q13564 534 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 PWP1Q13610 501 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 BBS9Q3SYG4 887 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 UGT3A1Q6NUS8 523 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 NIPAL1Q6NVV3 410 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.35□□□□□ -0.27
RPP40-201ENST00000319533 STRA8Q7Z7C7 330 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 ZNF227Q86WZ6 799 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 DOLPP1Q86YN1 238 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 ARMC10Q8N2F6 343 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 GHDCQ8N2G8 530 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 FAM98AQ8NCA5 519 aaKnown RBP13.35□□□□□ -0.27
RPP40-201ENST00000319533 EEF1AKMT1Q8WVE0 214 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 TSLPQ969D9 159 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 TBC1D20Q96BZ9 403 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 SNF8Q96H20 258 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 PEX11GQ96HA9 241 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 DMRTA2Q96SC8 542 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 KRT12Q99456 494 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 ENKD1Q9H0I2 346 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 LRFN1Q9P244 771 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 ASB1Q9Y576 335 aa13.35□□□□□ -0.27
RPP40-201ENST00000319533 E9PLN8 166 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 SNPHO15079 494 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 NME2P1O60361 137 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 TUBB4AP04350 444 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 CDH1P12830 882 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 CAPN3P20807 821 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 NME2P22392 152 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 IVDP26440 423 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 TRHRP34981 398 aaPredicted RBP13.34□□□□□ -0.27
RPP40-201ENST00000319533 RGS4P49798 205 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 OR4D2P58180 307 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 TAS2R50P59544 299 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 MEF2AQ02078 507 aaPredicted RBP13.34□□□□□ -0.27
RPP40-201ENST00000319533 OC90Q02509 493 aaPredicted RBP13.34□□□□□ -0.27
RPP40-201ENST00000319533 CRYMQ14894 314 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 TESK1Q15569 626 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 HSP90AA5PQ58FG0 334 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 RNFT1Q5M7Z0 435 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 SPANXN3Q5MJ09 141 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 ZNF468Q5VIY5 522 aaPredicted RBP13.34□□□□□ -0.27
RPP40-201ENST00000319533 MBOAT1Q6ZNC8 495 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 FGD2Q7Z6J4 655 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 RPS19BP1Q86WX3 136 aaKnown RBP13.34□□□□□ -0.27
RPP40-201ENST00000319533 ZNF740Q8NDX6 193 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 OR5T3Q8NGG3 340 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 KIF18AQ8NI77 898 aa13.34□□□□□ -0.27
RPP40-201ENST00000319533 VKORC1Q9BQB6 163 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms