RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 PLCL2Q9UPR0 1127 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 DLGAP4Q9Y2H0 992 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 KLK4Q9Y5K2 254 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 GNG14A0A1W2PPG7 69 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 DCDC2BA2VCK2 349 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 FOXE1O00358 373 aaPredicted RBP14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 EEDO75530 441 aaKnown RBP14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 CLEC3AO75596 197 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 LRATO95237 230 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 FKBP9O95302 570 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 MED26O95402 600 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 CD1EP15812 388 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 SSR2P43308 183 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 ACSM2AQ08AH3 577 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 PTGR1Q14914 329 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 NAA25Q14CX7 972 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 TMTC4Q5T4D3 741 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 ACSM2BQ68CK6 577 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 CHSY3Q70JA7 882 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 COMMD6Q7Z4G1 85 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 KIRREL3Q8IZU9 778 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 D2HGDHQ8N465 521 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 GBP7Q8N8V2 638 aaPredicted RBP14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 CEP70Q8NHQ1 597 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 KLHL6Q8WZ60 621 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 MS4A6EQ96DS6 147 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 MAELQ96JY0 434 aaKnown RBP14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 NMUR2Q9GZQ4 415 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 BRF2Q9HAW0 419 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 C1orf109Q9NX04 203 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 NDOR1Q9UHB4 597 aa14.66□□□□□ -0.06
PDLIM5-202ENST00000318007 CSO75390 466 aaKnown RBP14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 RSL1D1O76021 490 aaKnown RBP14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 TIAF1O95411 115 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 LBPP18428 481 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 ALAS2P22557 587 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 TACR1P25103 407 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 PTX3P26022 381 aaPredicted RBP14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 CERS1P27544 350 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 GABRA4P48169 554 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 BTN3A2P78410 334 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 TBL3Q12788 808 aaKnown RBP14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 SQSTM1Q13501 440 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 DEPDC1Q5TB30 811 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 IL23RQ5VWK5 629 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 CAMKVQ8NCB2 501 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 CCDC197Q8NCU1 140 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 TSSK3Q96PN8 268 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 TEFMQ96QE5 360 aaKnown RBP14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 SARGQ9BW04 601 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 NT5DC2Q9H857 520 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 MAU2Q9Y6X3 613 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 UBDO15205 165 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 DNAJB6O75190 326 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 SERPINA6P08185 405 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 G6PDP11413 515 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 MAPK10P53779 464 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 ZFP36L1Q07352 338 aaKnown RBP14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 SLC9A5Q14940 896 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 RSPO4Q2I0M5 234 aaPredicted RBP14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 C1orf189Q5VU69 101 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 FAM180BQ6P0A1 224 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 TRIM40Q6P9F5 258 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 ZNF793Q6ZN11 406 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 TTLL10Q6ZVT0 673 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 UBE3DQ7Z6J8 389 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 CACNA2D3Q8IZS8 1091 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 LIX1Q8N485 282 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 OR9I1Q8NGQ6 314 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 TM4SF19Q96DZ7 209 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 EGLN2Q96KS0 407 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 PPP3R2Q96LZ3 170 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 SERPINI1Q99574 410 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 SIKE1Q9BRV8 207 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 CENPKQ9BS16 269 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 RBCK1Q9BYM8 510 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 SLC6A16Q9GZN6 736 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 PITHD1Q9GZP4 211 aaPredicted RBP14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 LHX9Q9NQ69 397 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 PFDN4Q9NQP4 134 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 PDP2Q9P2J9 529 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 ARL2BPQ9Y2Y0 163 aa14.65□□□□□ -0.06
PDLIM5-202ENST00000318007 COL27A1Q8IZC6 1860 aaPredicted RBP14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 A0A0A6YYC8 382 aaPredicted RBP14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 I3L1I5 382 aaPredicted RBP14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 SGK494L7N484 410 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 PCDH7O60245 1069 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 PRKRAO75569 313 aaKnown RBP14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 MT-CO3P00414 261 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 NTRK1P04629 796 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 LIMK1P53667 647 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 STXBP1P61764 594 aaKnown RBP14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 C3orf38Q5JPI3 329 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 GPR135Q8IZ08 494 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 MMP21Q8N119 569 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 OR5T3Q8NGG3 340 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 OR9A4Q8NGU2 314 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 ZNF501Q96CX3 271 aaPredicted RBP14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 SLC7A5P2Q9GIP4 190 aa14.64□□□□□ -0.07
PDLIM5-202ENST00000318007 FANCEQ9HB96 536 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms