RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 CENPOQ9BU64 300 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 AMBNQ9NP70 447 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 MS4A12Q9NXJ0 267 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 BTBD3Q9Y2F9 522 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 PPIL1Q9Y3C6 166 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 GFRA2O00451 464 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 PRAMEF4O60810 478 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 SLITRK5O94991 958 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 CCNB2O95067 398 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 KRT75O95678 551 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 GALTP07902 379 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 NUDT7P0C024 238 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 AQP1P29972 269 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 GRK5P34947 590 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 CRATP43155 626 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 MAPK9P45984 424 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 COPZ1P61923 177 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 PCDH1Q08174 1060 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 PLD1Q13393 1074 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 DDX39BQ13838 428 aaKnown RBP13.32□□□□□ -0.28
MKS1-201ENST00000313863 STARD3Q14849 445 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 CARTPTQ16568 116 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.32□□□□□ -0.28
MKS1-201ENST00000313863 PRAMEF9Q5VWM5 478 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 LRRC66Q68CR7 880 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 RNF180Q86T96 592 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 TSPAN33Q86UF1 283 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 THOC6Q86W42 341 aaKnown RBP13.32□□□□□ -0.28
MKS1-201ENST00000313863 RNF130Q86XS8 419 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 KLHDC8AQ8IYD2 350 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 NAGSQ8N159 534 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 OXR1Q8N573 874 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 GOT1L1Q8NHS2 421 aaPredicted RBP13.32□□□□□ -0.28
MKS1-201ENST00000313863 ASZ1Q8WWH4 475 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 REPS1Q96D71 796 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 C11orf24Q96F05 449 aaPredicted RBP13.32□□□□□ -0.28
MKS1-201ENST00000313863 MGLLQ99685 303 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 PIP5K1AQ99755 562 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 ATG10Q9H0Y0 220 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 TPK1Q9H3S4 243 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 DNAH12Q6ZR08 3092 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 A0A1W2PQ67 120 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 C2orf78A6NCI8 922 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 TBKBP1A7MCY6 615 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 UGT2B17O75795 530 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 AP2A2O94973 939 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 C1QCP02747 245 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 HLA-EP13747 358 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 IDSP22304 550 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 PRIM2P49643 509 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 SCARB2Q14108 478 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 DOC2AQ14183 400 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 ZNF630Q2M218 657 aaPredicted RBP13.31□□□□□ -0.28
MKS1-201ENST00000313863 PLAG1Q6DJT9 500 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 TRIM40Q6P9F5 258 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 TMC5Q6UXY8 1006 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.31□□□□□ -0.28
MKS1-201ENST00000313863 IFNL1Q8IU54 200 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 APCDD1Q8J025 514 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 OR52N2Q8NGI0 321 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 MTERF1Q99551 399 aaKnown RBP13.31□□□□□ -0.28
MKS1-201ENST00000313863 EMILIN2Q9BXX0 1053 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 TP63Q9H3D4 680 aaPredicted RBP13.31□□□□□ -0.28
MKS1-201ENST00000313863 TMEM38AQ9H6F2 299 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 SGK2Q9HBY8 427 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 PRM3Q9NNZ6 103 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 ABCB8Q9NUT2 735 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 ATP6V1HQ9UI12 483 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 LSM7Q9UK45 103 aaKnown RBP13.31□□□□□ -0.28
MKS1-201ENST00000313863 ZNF451Q9Y4E5 1061 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 KIAA1671Q9BY89 1806 aa13.31□□□□□ -0.28
MKS1-201ENST00000313863 A8MX80 341 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 CENPBD1B2RD01 187 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 QSOX1O00391 747 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 YY2O15391 372 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 GSTM1P09488 218 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 CTGFP29279 349 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 TIA1P31483 386 aaKnown RBP eCLIP13.3□□□□□ -0.28
MKS1-201ENST00000313863 NR4A2P43354 598 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 HMGA2P52926 109 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 IFITM2Q01629 132 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 MED22Q15528 200 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 TSTQ16762 297 aaKnown RBP13.3□□□□□ -0.28
MKS1-201ENST00000313863 ANGPTL8Q6UXH0 198 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 TAS1R1Q7RTX1 841 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 SAPCD2Q86UD0 394 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 NPAS4Q8IUM7 802 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 FAM217AQ8IXS0 508 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 CYP4Z2PQ8N1L4 340 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 C1orf52Q8N6N3 182 aaKnown RBP13.3□□□□□ -0.28
MKS1-201ENST00000313863 MAL2Q969L2 176 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 MCCC1Q96RQ3 725 aaPredicted RBP13.3□□□□□ -0.28
MKS1-201ENST00000313863 BRD9Q9H8M2 597 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 SMURF1Q9HCE7 757 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 SH3BP4Q9P0V3 963 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 PCDHGB2Q9Y5G2 931 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 GNG14A0A1W2PPG7 69 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 TMEM229AB2RXF0 380 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 NT5C1B-RDH14C9J2C7 533 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 ADAM12O43184 909 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms