RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 CACNB2Q08289 660 aaPredicted RBP8.54□□□□□ -1.04
COL6A5-202ENST00000312481 FIP1L1Q6UN15 594 aaKnown RBP8.54□□□□□ -1.04
COL6A5-202ENST00000312481 CLDN22Q8N7P3 220 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 LGALS12Q96DT0 336 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 APOLD1Q96LR9 279 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 KCNC2Q96PR1 638 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 C17orf62Q9BQA9 187 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 BRINP2Q9C0B6 783 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 DAPL1A0PJW8 107 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 UPK1BO75841 260 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 GGT1P19440 569 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 PITPNBP48739 271 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 GPX6P59796 221 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 SLC36A3Q495N2 470 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 LPCAT3Q6P1A2 487 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 OR51E2Q9H255 320 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 TOR3AQ9H497 397 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 IFT46Q9NQC8 304 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 AIG1Q9NVV5 245 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 ASIC5Q9NY37 505 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 NUP50Q9UKX7 468 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 PCDHB11Q9Y5F2 797 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 ADH1BP00325 375 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 GALP22466 123 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 CSNK1DP48730 415 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 TGFBIQ15582 683 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 INAVAQ3KP66 663 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 OR52E8Q6IFG1 317 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 UGT2A3Q6UWM9 527 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 SERINC5Q86VE9 423 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 GNPDA2Q8TDQ7 276 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 SRRDQ9UH36 339 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 RNASET2O00584 256 aaKnown RBP8.53□□□□□ -1.04
COL6A5-202ENST00000312481 SCAMP3O14828 347 aaKnown RBP8.53□□□□□ -1.04
COL6A5-202ENST00000312481 PCDHGA12O60330 932 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 CORO1AP31146 461 aaKnown RBP8.53□□□□□ -1.04
COL6A5-202ENST00000312481 HMGCLP35914 325 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 GPR143P51810 404 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 CDK6Q00534 326 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 CYBRD1Q53TN4 286 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 C9orf64Q5T6V5 341 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 LRRC66Q68CR7 880 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 AADACL2Q6P093 401 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 KCTD18Q6PI47 426 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-202ENST00000312481 IL12RB2Q99665 862 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 ADAM29Q9UKF5 820 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 STK25O00506 426 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 AVPR1BP47901 424 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 VASH1Q7L8A9 365 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-202ENST00000312481 LRRC28Q86X40 367 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-202ENST00000312481 RBM18Q96H35 190 aaKnown RBP8.53□□□□□ -1.04
COL6A5-202ENST00000312481 REEP4Q9H6H4 257 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 ZDHHC6Q9H6R6 413 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 WDR55Q9H6Y2 383 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-202ENST00000312481 NIPAL2Q9H841 368 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 TOR4AQ9NXH8 423 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 PACSIN3Q9UKS6 424 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 ALG5Q9Y673 324 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 ARL5CA6NH57 179 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 WDPCPO95876 746 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 PSKH1P11801 424 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 ADH6P28332 368 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 SIX1Q15475 284 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-202ENST00000312481 KCNA10Q16322 511 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 ZNF782Q6ZMW2 699 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-202ENST00000312481 NTMT1Q9BV86 223 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 XYLT2Q9H1B5 865 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 OR2AG1Q9H205 316 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 PLEKHA1Q9HB21 404 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 TAS2R10Q9NYW0 307 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 NFKBIL1Q9UBC1 381 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-202ENST00000312481 IGKV6-21A0A0C4DH24 114 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 LILRB3O75022 631 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 IRF1P10914 325 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 S100A12P80511 92 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 MEF2DQ14814 521 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 ESRP1Q6NXG1 681 aaKnown RBP8.53□□□□□ -1.04
COL6A5-202ENST00000312481 OGDHLQ9ULD0 1010 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 FAM170AA1A519 330 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 ZNF670-ZNF695F2Z2N8 137 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 FLRT2O43155 660 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 TBX1O43435 398 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 MMP12P39900 470 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 FOXD4Q12950 439 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-202ENST00000312481 TIGD3Q6B0B8 471 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 FAM151BQ6UXP7 276 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 FCAMRQ8WWV6 532 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 TMEM234Q8WY98 164 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 HTRA1Q92743 480 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.53□□□□□ -1.04
COL6A5-202ENST00000312481 OSGEPL1Q9H4B0 414 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 TPT1P8Q9HAU6 139 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 MED31Q9Y3C7 131 aa8.53□□□□□ -1.04
COL6A5-202ENST00000312481 OR51F1A6NGY5 319 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 KLHL18O94889 574 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 FDXRP22570 491 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 ACTR1BP42025 376 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 MAP2K4P45985 399 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 KIAA1161Q6NSJ0 714 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 COX18Q8N8Q8 333 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms