RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 ACTR1AP61163 376 aa20.34■□□□□ 0.85
ATG4D-201ENST00000309469 ABATP80404 500 aa20.34■□□□□ 0.85
ATG4D-201ENST00000309469 CHRNB3Q05901 458 aa20.34■□□□□ 0.85
ATG4D-201ENST00000309469 PDK3Q15120 406 aa20.34■□□□□ 0.85
ATG4D-201ENST00000309469 KIAA0895LQ68EN5 471 aa20.34■□□□□ 0.85
ATG4D-201ENST00000309469 SLC30A9Q6PML9 568 aa20.34■□□□□ 0.85
ATG4D-201ENST00000309469 SYT13Q7L8C5 426 aa20.34■□□□□ 0.85
ATG4D-201ENST00000309469 NCLNQ969V3 563 aa20.34■□□□□ 0.85
ATG4D-201ENST00000309469 TOE1Q96GM8 510 aaKnown RBP20.34■□□□□ 0.85
ATG4D-201ENST00000309469 ZNF717Q9BY31 904 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-201ENST00000309469 ZNF624Q9P2J8 865 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-201ENST00000309469 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-201ENST00000309469 PRAMEF26H0Y7S4 382 aa20.33■□□□□ 0.85
ATG4D-201ENST00000309469 TOR1BO14657 336 aa20.33■□□□□ 0.85
ATG4D-201ENST00000309469 LDLRP01130 860 aa20.33■□□□□ 0.85
ATG4D-201ENST00000309469 MT-ND1P03886 318 aa20.33■□□□□ 0.85
ATG4D-201ENST00000309469 RETP07949 1114 aa20.33■□□□□ 0.85
ATG4D-201ENST00000309469 IL3P08700 152 aa20.33■□□□□ 0.85
ATG4D-201ENST00000309469 BSGP35613 385 aa20.33■□□□□ 0.85
ATG4D-201ENST00000309469 INTS11Q5TA45 600 aaKnown RBP20.33■□□□□ 0.85
ATG4D-201ENST00000309469 GPR155Q7Z3F1 870 aa20.33■□□□□ 0.85
ATG4D-201ENST00000309469 PLD3Q8IV08 490 aa20.33■□□□□ 0.85
ATG4D-201ENST00000309469 FAM20CQ8IXL6 584 aa20.33■□□□□ 0.85
ATG4D-201ENST00000309469 OR4A15Q8NGL6 344 aa20.33■□□□□ 0.85
ATG4D-201ENST00000309469 FBXO30Q8TB52 745 aa20.33■□□□□ 0.85
ATG4D-201ENST00000309469 NETO1Q8TDF5 533 aa20.33■□□□□ 0.85
ATG4D-201ENST00000309469 TPT1P8Q9HAU6 139 aa20.33■□□□□ 0.85
ATG4D-201ENST00000309469 DCAF13Q9NV06 445 aaKnown RBP20.33■□□□□ 0.85
ATG4D-201ENST00000309469 TMEM184CQ9NVA4 438 aa20.33■□□□□ 0.85
ATG4D-201ENST00000309469 TRNAU1APQ9NX07 287 aaKnown RBP20.33■□□□□ 0.85
ATG4D-201ENST00000309469 SPHK1Q9NYA1 384 aa20.33■□□□□ 0.85
ATG4D-201ENST00000309469 VPS4AQ9UN37 437 aa20.33■□□□□ 0.85
ATG4D-201ENST00000309469 EYSQ5T1H1 3165 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 TRBC2A0A5B9 178 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 C1orf226A1L170 272 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 DPPA5A6NC42 116 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 CHURC1-FNTBB4DL54 471 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 RTCAO00442 366 aaKnown RBP20.33■□□□□ 0.84
ATG4D-201ENST00000309469 SOCS2O14508 198 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 PEBP1P30086 187 aaKnown RBP20.33■□□□□ 0.84
ATG4D-201ENST00000309469 RABIFP47224 123 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 C6orf52Q5T4I8 152 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 ZCCHC8Q6NZY4 707 aaKnown RBP20.33■□□□□ 0.84
ATG4D-201ENST00000309469 ENPP6Q6UWR7 440 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 PAGE2Q7Z2X7 111 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 ABI3BPQ7Z7G0 1075 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 AMIGO1Q86WK6 493 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 ZNF687Q8N1G0 1237 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 MARVELD2Q8N4S9 558 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 PACRGLQ8N7B6 248 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 FAM86B1Q8N7N1 296 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 OR2L3Q8NG85 312 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 LCN9Q8WX39 176 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 JPH3Q8WXH2 748 aaPredicted RBP20.33■□□□□ 0.84
ATG4D-201ENST00000309469 LMAN1LQ9HAT1 526 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 SLC6A20Q9NP91 592 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 AASDHPPTQ9NRN7 309 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 GMEB1Q9Y692 573 aa20.33■□□□□ 0.84
ATG4D-201ENST00000309469 A0A1W2PPC1 479 aa20.32■□□□□ 0.84
ATG4D-201ENST00000309469 CAPN5O15484 640 aaPredicted RBP20.32■□□□□ 0.84
ATG4D-201ENST00000309469 GPR37L1O60883 481 aa20.32■□□□□ 0.84
ATG4D-201ENST00000309469 CLEC3AO75596 197 aa20.32■□□□□ 0.84
ATG4D-201ENST00000309469 KCNK5O95279 499 aa20.32■□□□□ 0.84
ATG4D-201ENST00000309469 SHMT2P34897 504 aa20.32■□□□□ 0.84
ATG4D-201ENST00000309469 EPHX4Q8IUS5 362 aa20.32■□□□□ 0.84
ATG4D-201ENST00000309469 CBR4Q8N4T8 237 aa20.32■□□□□ 0.84
ATG4D-201ENST00000309469 OR13H1Q8NG92 308 aa20.32■□□□□ 0.84
ATG4D-201ENST00000309469 OR4E2Q8NGC2 313 aa20.32■□□□□ 0.84
ATG4D-201ENST00000309469 GOT1L1Q8NHS2 421 aaPredicted RBP20.32■□□□□ 0.84
ATG4D-201ENST00000309469 QRFPRQ96P65 431 aa20.32■□□□□ 0.84
ATG4D-201ENST00000309469 C9orf16Q9BUW7 83 aa20.32■□□□□ 0.84
ATG4D-201ENST00000309469 OR6C2Q9NZP2 312 aa20.32■□□□□ 0.84
ATG4D-201ENST00000309469 ZNF282Q9UDV7 671 aaPredicted RBP20.32■□□□□ 0.84
ATG4D-201ENST00000309469 CA14Q9ULX7 337 aa20.32■□□□□ 0.84
ATG4D-201ENST00000309469 WBP11Q9Y2W2 641 aaKnown RBP20.32■□□□□ 0.84
ATG4D-201ENST00000309469 ARHGAP10A1A4S6 786 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 A6NCN8 305 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 NDUFS4O43181 175 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 CCNDBP1O95273 360 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 PPIBP23284 216 aaKnown RBP20.31■□□□□ 0.84
ATG4D-201ENST00000309469 GRK3P35626 688 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 MAPK12P53778 367 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 MPEG1Q2M385 716 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 CPZQ66K79 652 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 NRROSQ86YC3 692 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 SYNPOQ8N3V7 929 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 TTLQ8NG68 377 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 PNPT1Q8TCS8 783 aaKnown RBP20.31■□□□□ 0.84
ATG4D-201ENST00000309469 CREB3L4Q8TEY5 395 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 ZFP90Q8TF47 636 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 POP5Q969H6 163 aaKnown RBP20.31■□□□□ 0.84
ATG4D-201ENST00000309469 RGMAQ96B86 450 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 C2orf42Q9NWW7 574 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 OAZ3Q9UMX2 235 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 PCDHGB4Q9UN71 923 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 TRBV23OR9-2A0A075B6M9 112 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 CLOCKO15516 846 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 PRKD3O94806 890 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 CMPK1P30085 196 aa20.31■□□□□ 0.84
ATG4D-201ENST00000309469 SLC19A1P41440 591 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms