RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 ANKRD53Q8N9V6 530 aa18.8■□□□□ 0.6
VEGFB-201ENST00000309422 SLC6A16Q9GZN6 736 aa18.8■□□□□ 0.6
VEGFB-201ENST00000309422 ROGDIQ9GZN7 287 aa18.8■□□□□ 0.6
VEGFB-201ENST00000309422 REXO4Q9GZR2 422 aaKnown RBP18.8■□□□□ 0.6
VEGFB-201ENST00000309422 ING2Q9H160 280 aa18.8■□□□□ 0.6
VEGFB-201ENST00000309422 SYNPO2LQ9H987 977 aa18.8■□□□□ 0.6
VEGFB-201ENST00000309422 CLK4Q9HAZ1 481 aaKnown RBP18.8■□□□□ 0.6
VEGFB-201ENST00000309422 SLC22A11Q9NSA0 550 aa18.8■□□□□ 0.6
VEGFB-201ENST00000309422 COPG2Q9UBF2 871 aa18.8■□□□□ 0.6
VEGFB-201ENST00000309422 STK38LQ9Y2H1 464 aa18.8■□□□□ 0.6
VEGFB-201ENST00000309422 KCNMB2Q9Y691 235 aa18.8■□□□□ 0.6
VEGFB-201ENST00000309422 IGLV3-12A0A075B6K2 115 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 VSTM2BA6NLU5 285 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 ERI3O43414 337 aaKnown RBP18.79■□□□□ 0.6
VEGFB-201ENST00000309422 SIX3O95343 332 aaPredicted RBP18.79■□□□□ 0.6
VEGFB-201ENST00000309422 ACPPP15309 386 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 ATP5F1P24539 256 aaPredicted RBP18.79■□□□□ 0.6
VEGFB-201ENST00000309422 XCR1P46094 333 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 RAB8AP61006 207 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 MAT1AQ00266 395 aaKnown RBP18.79■□□□□ 0.6
VEGFB-201ENST00000309422 KLC1Q07866 573 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 FAM69BQ5VUD6 431 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 TTC19Q6DKK2 380 aaPredicted RBP18.79■□□□□ 0.6
VEGFB-201ENST00000309422 CROCCP2Q86T23 111 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 APLFQ8IW19 511 aaPredicted RBP18.79■□□□□ 0.6
VEGFB-201ENST00000309422 MREGQ8N565 214 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 DTWD1Q8N5C7 304 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 OR51Q1Q8NH59 317 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 C9orf43Q8TAL5 461 aaPredicted RBP18.79■□□□□ 0.6
VEGFB-201ENST00000309422 ADAMTS17Q8TE56 1095 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 ADAMTS18Q8TE60 1221 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 OR1F2PQ96R84 312 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 TGIF2Q9GZN2 237 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 P4HTMQ9NXG6 502 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 GRID1Q9ULK0 1009 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 MRPS2Q9Y399 296 aaKnown RBP18.79■□□□□ 0.6
VEGFB-201ENST00000309422 ASB1Q9Y576 335 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 SPACA6W5XKT8 324 aa18.79■□□□□ 0.6
VEGFB-201ENST00000309422 ZNF860A6NHJ4 632 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 AGPSO00116 658 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 B3GALT2O43825 422 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 GALR3O60755 368 aaPredicted RBP18.78■□□□□ 0.6
VEGFB-201ENST00000309422 CLDN9O95484 217 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 OTCP00480 354 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 UQCRHP07919 91 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 FURINP09958 794 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 MYL2P10916 166 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 CASP2P42575 452 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 RAP1GDS1P52306 607 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 AP2B1P63010 937 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 DDX39BQ13838 428 aaKnown RBP18.78■□□□□ 0.6
VEGFB-201ENST00000309422 TUBB8Q3ZCM7 444 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 VWA2Q5GFL6 755 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 C10orf62Q5T681 223 aaPredicted RBP18.78■□□□□ 0.6
VEGFB-201ENST00000309422 CHSY3Q70JA7 882 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 ARHGEF39Q8N4T4 335 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 AMER3Q8N944 861 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 UTP15Q8TED0 518 aaKnown RBP18.78■□□□□ 0.6
VEGFB-201ENST00000309422 SREK1Q8WXA9 508 aaKnown RBP18.78■□□□□ 0.6
VEGFB-201ENST00000309422 MOCOSQ96EN8 888 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 KCNC2Q96PR1 638 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 NOL11Q9H8H0 719 aaKnown RBP18.78■□□□□ 0.6
VEGFB-201ENST00000309422 TMEM216Q9P0N5 145 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 RAB21Q9UL25 225 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 MKL2Q9ULH7 1088 aa18.78■□□□□ 0.6
VEGFB-201ENST00000309422 A8MT66 165 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 IDSB3KWA1 339 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 E2F3O00716 465 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 FFAR3O14843 346 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 GPR42O15529 346 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 WFS1O76024 890 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 ALPPP05187 535 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 UMODP07911 640 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 KRT4P19013 534 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 NAA20P61599 178 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 HERVK_113P63132 956 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 LY6DQ14210 128 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 TMEM35AQ53FP2 167 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 AFAP1L2Q8N4X5 818 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 OR2L5Q8NG80 312 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 OR2W6PQ8NHA6 318 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 CREB3L4Q8TEY5 395 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 CMTM7Q96FZ5 175 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 SMC6Q96SB8 1091 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 ERVK-6Q9BXR3 956 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 RHBGQ9H310 441 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 PLAAQ9Y263 795 aa18.77■□□□□ 0.6
VEGFB-201ENST00000309422 MRPS33Q9Y291 106 aaKnown RBP18.77■□□□□ 0.6
VEGFB-201ENST00000309422 CCDC151A5D8V7 595 aa18.76■□□□□ 0.59
VEGFB-201ENST00000309422 LRIT2A6NDA9 550 aa18.76■□□□□ 0.59
VEGFB-201ENST00000309422 CNOT3O75175 753 aaKnown RBP18.76■□□□□ 0.59
VEGFB-201ENST00000309422 SUPT7LO94864 414 aa18.76■□□□□ 0.59
VEGFB-201ENST00000309422 MYZAPP0CAP1 466 aa18.76■□□□□ 0.59
VEGFB-201ENST00000309422 C8orf89P0DMQ9 161 aa18.76■□□□□ 0.59
VEGFB-201ENST00000309422 CCL11P51671 97 aa18.76■□□□□ 0.59
VEGFB-201ENST00000309422 BTN3A2P78410 334 aa18.76■□□□□ 0.59
VEGFB-201ENST00000309422 PCDH1Q08174 1060 aa18.76■□□□□ 0.59
VEGFB-201ENST00000309422 IFT88Q13099 833 aa18.76■□□□□ 0.59
VEGFB-201ENST00000309422 CPSF6Q16630 551 aaKnown RBP eCLIP18.76■□□□□ 0.59
VEGFB-201ENST00000309422 SYT16Q17RD7 645 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms