RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 TUBA3CQ13748 450 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 MTFR2Q6P444 385 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 PAQR6Q6TCH4 344 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 PTRH1Q86Y79 214 aaKnown RBP14.05□□□□□ -0.16
PTPN9-201ENST00000306726 MMP21Q8N119 569 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 CYP4Z2PQ8N1L4 340 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 RHBDF1Q96CC6 855 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 EID2BQ96D98 161 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 FYTTD1Q96QD9 318 aaKnown RBP14.05□□□□□ -0.16
PTPN9-201ENST00000306726 CDK5RAP1Q96SZ6 601 aaKnown RBP14.05□□□□□ -0.16
PTPN9-201ENST00000306726 NRTNQ99748 197 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 PRR14Q9BWN1 585 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 HDHD2Q9H0R4 259 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.05□□□□□ -0.16
PTPN9-201ENST00000306726 RPS6KA6Q9UK32 745 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 CARD8Q9Y2G2 431 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 GPR52Q9Y2T5 361 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 CDRT1O95170 752 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 CPNE6O95741 557 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 ALOX5P09917 674 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 BPIP17213 487 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 GPC1P35052 558 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 UGT8Q16880 541 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 XKR7Q5GH72 579 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 FRG2Q64ET8 278 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 Q6ZVL8 140 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 FRG2BQ96QU4 278 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 MAGEH1Q9H213 219 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 TMEM184CQ9NVA4 438 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 NKIRAS2Q9NYR9 191 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 PSKH1P11801 424 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 DEFB103AP81534 67 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 SDE2Q6IQ49 451 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 LAIR2Q6ISS4 152 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 FUT10Q6P4F1 479 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 USP51Q70EK9 711 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 RNF130Q86XS8 419 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 MYDGFQ969H8 173 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 EMILIN2Q9BXX0 1053 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 IRF2BPLQ9H1B7 796 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 CLEC2DQ9UHP7 191 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 CLEC4EQ9ULY5 219 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 FNDC1Q4ZHG4 1894 aaPredicted RBP14.04□□□□□ -0.16
PTPN9-201ENST00000306726 PIPSLA2A3N6 862 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 HOXB8P17481 243 aaPredicted RBP14.04□□□□□ -0.16
PTPN9-201ENST00000306726 FPR1P21462 350 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 SLC11A1P49279 550 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 COX20Q5RI15 118 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 C8orf82Q6P1X6 216 aaPredicted RBP14.04□□□□□ -0.16
PTPN9-201ENST00000306726 TMPRSS11AQ6ZMR5 421 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 Q6ZVU0 165 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 LYSMD2Q8IV50 215 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 TCEANCQ8N8B7 351 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 GPR26Q8NDV2 337 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 RHOXF1Q8NHV9 184 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 GPR151Q8TDV0 419 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 SLC38A4Q969I6 547 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 TMEM159Q96B96 161 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 YTHDF1Q9BYJ9 559 aaKnown RBP14.04□□□□□ -0.16
PTPN9-201ENST00000306726 BRINP2Q9C0B6 783 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 MUC13Q9H3R2 512 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 CWH43Q9H720 699 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 QPCTLQ9NXS2 382 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 KIAA1522Q9P206 1035 aaPredicted RBP14.04□□□□□ -0.16
PTPN9-201ENST00000306726 ERVK-11Q9UQG0 969 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 KPNA3O00505 521 aaPredicted RBP14.04□□□□□ -0.16
PTPN9-201ENST00000306726 ZNF197O14709 1029 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 CLDN11O75508 207 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 ERAL1O75616 437 aaKnown RBP14.04□□□□□ -0.16
PTPN9-201ENST00000306726 KCNK2O95069 426 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 CLEC2LP0C7M8 214 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 PIK3CBP42338 1070 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 ARF5P84085 180 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 C5orf22Q49AR2 442 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 TMIGD1Q6UXZ0 262 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 RRM2BQ7LG56 351 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 BBS7Q8IWZ6 715 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 FKBP10Q96AY3 582 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 EXOSC8Q96B26 276 aaKnown RBP14.04□□□□□ -0.16
PTPN9-201ENST00000306726 PPP1R14BQ96C90 147 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 IL17FQ96PD4 163 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 MGLLQ99685 303 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 TMCC3Q9ULS5 477 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 PCM1Q15154 2024 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 PIKFYVEQ9Y2I7 2098 aa14.04□□□□□ -0.16
PTPN9-201ENST00000306726 LZTS3O60299 673 aaPredicted RBP14.03□□□□□ -0.16
PTPN9-201ENST00000306726 CACNG3O60359 315 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 OAZ2O95190 189 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 INHBBP09529 407 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 PEPDP12955 493 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 ZFP36L2P47974 494 aaKnown RBP14.03□□□□□ -0.16
PTPN9-201ENST00000306726 CLCN7P51798 805 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 PLEKHG6Q3KR16 790 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 ERAP2Q6P179 960 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 DHRS4L2Q6PKH6 230 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 CASP12Q6UXS9 341 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 VASH1Q7L8A9 365 aaPredicted RBP14.03□□□□□ -0.16
PTPN9-201ENST00000306726 SLC39A11Q8N1S5 342 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 OR8J3Q8NGG0 315 aa14.03□□□□□ -0.16
PTPN9-201ENST00000306726 CLP1Q92989 425 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms