RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 VPS50Q96JG6 964 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 NSUN5Q96P11 429 aaKnown RBP10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 NTMT1Q9BV86 223 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 C1QTNF3Q9BXJ4 246 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SLC6A16Q9GZN6 736 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 REXO4Q9GZR2 422 aaKnown RBP10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SLC26A1Q9H2B4 701 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SOX17Q9H6I2 414 aaPredicted RBP10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 MKKSQ9NPJ1 570 aaPredicted RBP10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CTSFQ9UBX1 484 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 EMCNQ9ULC0 261 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 POLHQ9Y253 713 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 NAALAD2Q9Y3Q0 740 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 MAP4K5Q9Y4K4 846 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 FREM2Q5SZK8 3169 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SGK494L7N484 410 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 OR7A17O14581 309 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 NKX2-8O15522 239 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CTIFO43310 598 aaKnown RBP10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ERI3O43414 337 aaKnown RBP10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 PRAMEF4O60810 478 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SPAG7O75391 227 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 RDH16O75452 317 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ONECUT2O95948 504 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 RECKO95980 971 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CPA3P15088 417 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 IMPDH1P20839 514 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 OTX2P32243 289 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 RAP1GDS1P52306 607 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CDH13P55290 713 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 RAB8AP61006 207 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CLCQ05315 142 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 IFT88Q13099 833 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 IL10RAQ13651 578 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SSPNQ14714 243 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 NKG7Q16617 165 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CPSF6Q16630 551 aaKnown RBP eCLIP10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 GGTA1PQ4G0N0 100 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 DEFB134Q4QY38 66 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 PRAMEF9Q5VWM5 478 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 LIPMQ5VYY2 423 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 RPS27LQ71UM5 84 aaKnown RBP10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 PRSS41Q7RTY9 318 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 MILR1Q7Z6M3 343 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 LAS2Q8IYD9 372 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CCNYL1Q8N7R7 359 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 L3MBTL4Q8NA19 623 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SRFBP1Q8NEF9 429 aaKnown RBP10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ARMC2Q8NEN0 867 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 MYRIPQ8NFW9 859 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 OR7G3Q8NG95 312 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 OR52B6Q8NGF0 335 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 STT3BQ8TCJ2 826 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 UTP15Q8TED0 518 aaKnown RBP10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 TRPC4APQ8TEL6 797 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CREB3L4Q8TEY5 395 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 THAP4Q8WY91 577 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 L3HYPDHQ96EM0 354 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 IP6K3Q96PC2 410 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 FAM111AQ96PZ2 611 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CDK15Q96Q40 435 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ARHGAP9Q9BRR9 750 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CRB3Q9BUF7 120 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 RHBGQ9H310 441 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SLC22A11Q9NSA0 550 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 HCN3Q9P1Z3 774 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 MAN2B2Q9Y2E5 1009 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 PLLPQ9Y342 182 aa10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 MRPS2Q9Y399 296 aaKnown RBP10.43□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CACNA1BQ00975 2339 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ZNF860A6NHJ4 632 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 G3V2L1 256 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 H0YIV9 168 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 PSMD12O00232 456 aaPredicted RBP10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 PEX12O00623 359 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 FFAR3O14843 346 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 GPR42O15529 346 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 GALR3O60755 368 aaPredicted RBP10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CRCPO75575 148 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 IGHEP01854 428 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ITGB2P05107 769 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ZGLP1P0C6A0 271 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 TSPAN8P19075 237 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 HMOX2P30519 316 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 HNRNPH1P31943 449 aaKnown RBP10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 PIK3CBP42338 1070 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 MAT1AQ00266 395 aaKnown RBP10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 TRAF3Q13114 568 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CASP8Q14790 479 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ZRSR2Q15696 482 aaKnown RBP10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SYT16Q17RD7 645 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 DEFB109BQ30KR1 87 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 UNC50Q53HI1 259 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 C10orf62Q5T681 223 aaPredicted RBP10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ATP1A1-AS1Q5TC04 95 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 BORAQ6PGQ7 559 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SHISA6Q6ZSJ9 500 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 GPRIN3Q6ZVF9 776 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CHSY3Q70JA7 882 aa10.42□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 PRSS58Q8IYP2 241 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms