RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 FAM46DQ8NEK8 389 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 GRPEL2Q8TAA5 225 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 ZNF461Q8TAF7 563 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 SH3RF2Q8TEC5 729 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 BEX2Q9BXY8 128 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 ABCD2Q9UBJ2 740 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 HSPE1-MOB4S4R3N1 261 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 C1QTNF3-AMACRE9PGA6 284 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 IFI30P13284 250 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 ZNF763Q0D2J5 394 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 E2F2Q14209 437 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 ZNF648Q5T619 568 aaPredicted RBP12.82□□□□□ -0.36
DDX54-201ENST00000306014 GALNT7Q86SF2 657 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 SLC5A8Q8N695 610 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 CYB5D2Q8WUJ1 264 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 NUDT8Q8WV74 236 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 RFKQ969G6 155 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 ARMC5Q96C12 935 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 EGLN2Q96KS0 407 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 ZNF583Q96ND8 569 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 ZBTB20Q9HC78 741 aaPredicted RBP12.82□□□□□ -0.36
DDX54-201ENST00000306014 ACSL6Q9UKU0 697 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 LY75O60449 1722 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 CARNS1A5YM72 827 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 HHLA1C9JL84 531 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 DOC2AQ14183 400 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 IDNKQ5T6J7 187 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 MND1Q9BWT6 205 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 SLITRK2Q9H156 845 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 IL26Q9NPH9 171 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 PCDHGA10Q9Y5H3 936 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 CPSF4LA6NMK7 179 aaKnown RBP12.82□□□□□ -0.36
DDX54-201ENST00000306014 AXIN1O15169 862 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 CH25HO95992 272 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 ETFAP13804 333 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 PFKLP17858 780 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 FCHO2Q0JRZ9 810 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 C22orf39Q6P5X5 142 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 PAPD5Q8NDF8 572 aaKnown RBP12.82□□□□□ -0.36
DDX54-201ENST00000306014 PIGXQ8TBF5 258 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 RPL3LQ92901 407 aaKnown RBP12.82□□□□□ -0.36
DDX54-201ENST00000306014 TBX5Q99593 518 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 TRIT1Q9H3H1 467 aaKnown RBP12.82□□□□□ -0.36
DDX54-201ENST00000306014 GPN2Q9H9Y4 310 aaPredicted RBP12.82□□□□□ -0.36
DDX54-201ENST00000306014 DPP7Q9UHL4 492 aa12.82□□□□□ -0.36
DDX54-201ENST00000306014 CFAP20Q9Y6A4 193 aaKnown RBP12.82□□□□□ -0.36
DDX54-201ENST00000306014 FAM86C2PA6NEL3 165 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 PRMT3O60678 531 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 C8AP07357 584 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 YES1P07947 543 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 TLE2Q04725 743 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 CSTF1Q05048 431 aaKnown RBP12.81□□□□□ -0.36
DDX54-201ENST00000306014 WSCD2Q2TBF2 565 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 PROX2Q3B8N5 592 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 TBRG1Q3YBR2 411 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 ASB18Q6ZVZ8 466 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 CHCHD4Q8N4Q1 142 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 FLCNQ8NFG4 579 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 GRXCR2A6NFK2 248 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 MTHFD2P13995 350 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 SLC6A4P31645 630 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 AVPR1BP47901 424 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 CRISP3P54108 245 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 FPGSQ05932 587 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 NDUFAF6Q330K2 333 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 LIPKQ5VXJ0 399 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 RNF44Q7L0R7 432 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 MRPL10Q7Z7H8 261 aaKnown RBP12.81□□□□□ -0.36
DDX54-201ENST00000306014 ZFP3Q96NJ6 502 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 BRINP2Q9C0B6 783 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 SMG9Q9H0W8 520 aaKnown RBP12.81□□□□□ -0.36
DDX54-201ENST00000306014 REEP4Q9H6H4 257 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 THG1LQ9NWX6 298 aaKnown RBP12.81□□□□□ -0.36
DDX54-201ENST00000306014 TAS2R7Q9NYW3 318 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 PRAMEF33A0A0G2JMD5 474 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 ARHGEF33A8MVX0 844 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 SCAMP1O15126 338 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 TLL1O43897 1013 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 PRAMEF10O60809 474 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 SOCS5O75159 536 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 GALTP07902 379 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 JUPP14923 745 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 HRH2P25021 359 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 CREMQ03060 361 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 SUZ12Q15022 739 aaKnown RBP12.81□□□□□ -0.36
DDX54-201ENST00000306014 TPGS2Q68CL5 300 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 TMEM80Q96HE8 168 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 CCM2Q9BSQ5 444 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 OR51V1Q9H2C8 321 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 GSAPA4D1B5 854 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 STK25O00506 426 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 ITGBL1O95965 494 aaPredicted RBP12.81□□□□□ -0.36
DDX54-201ENST00000306014 STATHP02808 62 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 CCL5P13501 91 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 SDC1P18827 310 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 C21orf33P30042 268 aaPredicted RBP12.81□□□□□ -0.36
DDX54-201ENST00000306014 PPM1AP35813 382 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 HNRNPA0Q13151 305 aaKnown RBP12.81□□□□□ -0.36
DDX54-201ENST00000306014 CTSL3PQ5NE16 218 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 PRAMEF14Q5SWL7 426 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms