RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 SLCO1B7G3V0H7 640 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 ATP6AP2O75787 350 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 FGF5P12034 268 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 PTX3P26022 381 aaPredicted RBP25.82■■□□□ 1.72
HDAC3-201ENST00000305264 GRM7Q14831 915 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 DEPDC1Q5TB30 811 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 PWWP2BQ6NUJ5 590 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 Q6ZSR9 355 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 DTWD1Q8N5C7 304 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 NPHS2Q9NP85 383 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 TXNDC9O14530 226 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 ZNF888P0CJ79 500 aaPredicted RBP25.82■■□□□ 1.72
HDAC3-201ENST00000305264 GCGRP47871 477 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 HK2P52789 917 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 STXBP1P61764 594 aaKnown RBP25.82■■□□□ 1.72
HDAC3-201ENST00000305264 IMPG1Q17R60 797 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 MTERF4Q7Z6M4 381 aaKnown RBP25.82■■□□□ 1.72
HDAC3-201ENST00000305264 OR8K5Q8NH50 307 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 SERPINI1Q99574 410 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 MRPL1Q9BYD6 325 aaKnown RBP25.82■■□□□ 1.72
HDAC3-201ENST00000305264 MEAF6Q9HAF1 191 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 PSD3Q9NYI0 1048 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 GIMAP2Q9UG22 337 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 A0A0G2JN53 185 aa25.81■■□□□ 1.72
HDAC3-201ENST00000305264 HYKKA2RU49 373 aa25.81■■□□□ 1.72
HDAC3-201ENST00000305264 ERI3O43414 337 aaKnown RBP25.81■■□□□ 1.72
HDAC3-201ENST00000305264 B3GALT4O96024 378 aa25.81■■□□□ 1.72
HDAC3-201ENST00000305264 RAB8AP61006 207 aa25.81■■□□□ 1.72
HDAC3-201ENST00000305264 CUL3Q13618 768 aa25.81■■□□□ 1.72
HDAC3-201ENST00000305264 MANEAQ5SRI9 462 aa25.81■■□□□ 1.72
HDAC3-201ENST00000305264 TLDC1Q6P9B6 456 aa25.81■■□□□ 1.72
HDAC3-201ENST00000305264 CYB5D1Q6P9G0 228 aa25.81■■□□□ 1.72
HDAC3-201ENST00000305264 CHSY3Q70JA7 882 aa25.81■■□□□ 1.72
HDAC3-201ENST00000305264 UBE3DQ7Z6J8 389 aa25.81■■□□□ 1.72
HDAC3-201ENST00000305264 TTC29Q8NA56 475 aaPredicted RBP25.81■■□□□ 1.72
HDAC3-201ENST00000305264 UTP15Q8TED0 518 aaKnown RBP25.81■■□□□ 1.72
HDAC3-201ENST00000305264 VPS29Q9UBQ0 182 aa25.81■■□□□ 1.72
HDAC3-201ENST00000305264 SLC28A1O00337 649 aa25.8■■□□□ 1.72
HDAC3-201ENST00000305264 ZNF749O43361 778 aa25.8■■□□□ 1.72
HDAC3-201ENST00000305264 ALOX15P16050 662 aaPredicted RBP25.8■■□□□ 1.72
HDAC3-201ENST00000305264 PLA2G16P53816 162 aa25.8■■□□□ 1.72
HDAC3-201ENST00000305264 TMEM126BQ8IUX1 230 aa25.8■■□□□ 1.72
HDAC3-201ENST00000305264 HOMEZQ8IX15 550 aa25.8■■□□□ 1.72
HDAC3-201ENST00000305264 RFWD2Q8NHY2 731 aa25.8■■□□□ 1.72
HDAC3-201ENST00000305264 GAL3ST3Q96A11 431 aa25.8■■□□□ 1.72
HDAC3-201ENST00000305264 C17orf62Q9BQA9 187 aa25.8■■□□□ 1.72
HDAC3-201ENST00000305264 RTCAO00442 366 aaKnown RBP25.8■■□□□ 1.72
HDAC3-201ENST00000305264 PLPP1O14494 284 aa25.8■■□□□ 1.72
HDAC3-201ENST00000305264 SDHDO14521 159 aa25.8■■□□□ 1.72
HDAC3-201ENST00000305264 TGDSO95455 350 aa25.8■■□□□ 1.72
HDAC3-201ENST00000305264 TBL3Q12788 808 aaKnown RBP25.8■■□□□ 1.72
HDAC3-201ENST00000305264 SF3A3Q12874 501 aaKnown RBP eCLIP25.8■■□□□ 1.722e-6■■■■□ 20.9
HDAC3-201ENST00000305264 NR6A1Q15406 480 aa25.8■■□□□ 1.72
HDAC3-201ENST00000305264 PRSS41Q7RTY9 318 aa25.8■■□□□ 1.72
HDAC3-201ENST00000305264 OR2L5Q8NG80 312 aa25.8■■□□□ 1.72
HDAC3-201ENST00000305264 CCT7Q99832 543 aa25.8■■□□□ 1.72
HDAC3-201ENST00000305264 SORBS1Q9BX66 1292 aaKnown RBP25.8■■□□□ 1.72
HDAC3-201ENST00000305264 B3GALT1Q9Y5Z6 326 aa25.8■■□□□ 1.72
HDAC3-201ENST00000305264 FER1L5A0AVI2 2057 aa25.8■■□□□ 1.72
HDAC3-201ENST00000305264 TRPC5OSA6NMA1 111 aa25.79■■□□□ 1.72
HDAC3-201ENST00000305264 RGS14O43566 566 aa25.79■■□□□ 1.72
HDAC3-201ENST00000305264 SHOX2O60902 331 aaPredicted RBP25.79■■□□□ 1.72
HDAC3-201ENST00000305264 SCRG1O75711 98 aa25.79■■□□□ 1.72
HDAC3-201ENST00000305264 AQP5P55064 265 aa25.79■■□□□ 1.72
HDAC3-201ENST00000305264 RAB15P59190 212 aa25.79■■□□□ 1.72
HDAC3-201ENST00000305264 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.79■■□□□ 1.72
HDAC3-201ENST00000305264 SLC9B1Q4ZJI4 515 aa25.79■■□□□ 1.72
HDAC3-201ENST00000305264 TMEM35AQ53FP2 167 aa25.79■■□□□ 1.72
HDAC3-201ENST00000305264 SPDYAQ5MJ70 313 aa25.79■■□□□ 1.72
HDAC3-201ENST00000305264 BPHLQ86WA6 291 aaPredicted RBP25.79■■□□□ 1.72
HDAC3-201ENST00000305264 APIPQ96GX9 242 aa25.79■■□□□ 1.72
HDAC3-201ENST00000305264 FAM107BQ9H098 131 aa25.79■■□□□ 1.72
HDAC3-201ENST00000305264 WDR55Q9H6Y2 383 aaPredicted RBP25.79■■□□□ 1.72
HDAC3-201ENST00000305264 LHX9Q9NQ69 397 aa25.79■■□□□ 1.72
HDAC3-201ENST00000305264 CUTCQ9NTM9 273 aa25.79■■□□□ 1.72
HDAC3-201ENST00000305264 DHCR7Q9UBM7 475 aaKnown RBP25.79■■□□□ 1.72
HDAC3-201ENST00000305264 DCTN4Q9UJW0 460 aa25.79■■□□□ 1.72
HDAC3-201ENST00000305264 GOLGA8QA0A0J9YX86 632 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 GOLGA8OA6NCC3 632 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 GMNCA6NCL1 334 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 GOLGA8NF8WBI6 632 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 LSM1O15116 133 aaKnown RBP25.78■■□□□ 1.72
HDAC3-201ENST00000305264 RSL1D1O76021 490 aaKnown RBP25.78■■□□□ 1.72
HDAC3-201ENST00000305264 IL1RNP18510 177 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 EPHA3P29320 983 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 RAP1GDS1P52306 607 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 FOXC1Q12948 553 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 ABHD17CQ6PCB6 329 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 ZNF717Q9BY31 904 aaPredicted RBP25.78■■□□□ 1.72
HDAC3-201ENST00000305264 TRIM55Q9BYV6 548 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 URADA6NGE7 173 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 SEMA3DO95025 777 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 SMIM10L1P0DMW3 83 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 DEFB134Q4QY38 66 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 DCAF12Q5T6F0 453 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 GARNL3Q5VVW2 1013 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 TRIM40Q6P9F5 258 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 CEACAM20Q6UY09 585 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 TTLL10Q6ZVT0 673 aa25.78■■□□□ 1.72
HDAC3-201ENST00000305264 ABHD13Q7L211 337 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms