RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 PCGF2P35227 344 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 RPL5P46777 297 aaKnown RBP18.59■□□□□ 0.57
HOXC4-201ENST00000303406 ARSFP54793 590 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 TAS2R50P59544 299 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 NFATC4Q14934 902 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 ANKRD53Q8N9V6 530 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 MRGPRX1Q96LB2 322 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 ACAT2Q9BWD1 397 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 KIR3DX1Q9H7L2 352 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 MYRFQ9Y2G1 1151 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 GPSM3Q9Y4H4 160 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 PCDHGB5Q9Y5G0 923 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 TRBC2A0A5B9 178 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 PRSS38A1L453 326 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 H3BNH8 94 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 TOR1BO14657 336 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 CAPN5O15484 640 aaPredicted RBP18.59■□□□□ 0.57
HOXC4-201ENST00000303406 MT-ND1P03886 318 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 SEMG1P04279 462 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 NDUFS1P28331 727 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 ARFIP1P53367 373 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 TRA2BP62995 288 aaKnown RBP18.59■□□□□ 0.57
HOXC4-201ENST00000303406 CSNK1G2P78368 415 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 RBBP4Q09028 425 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 FADDQ13158 208 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 CLCA4Q14CN2 919 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 RGNQ15493 299 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 TEAD4Q15561 434 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.59■□□□□ 0.57
HOXC4-201ENST00000303406 USP51Q70EK9 711 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 CBLL1Q75N03 491 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 EIF3MQ7L2H7 374 aaKnown RBP18.59■□□□□ 0.57
HOXC4-201ENST00000303406 ZDHHC13Q8IUH4 622 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 C2orf73Q8N5S3 287 aaPredicted RBP18.59■□□□□ 0.57
HOXC4-201ENST00000303406 OR5K1Q8NHB7 308 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 ZFP28Q8NHY6 868 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 OSBPL10Q9BXB5 764 aa18.59■□□□□ 0.57
HOXC4-201ENST00000303406 ZNF717Q9BY31 904 aaPredicted RBP18.59■□□□□ 0.57
HOXC4-201ENST00000303406 IMP3Q9NV31 184 aaKnown RBP18.59■□□□□ 0.57
HOXC4-201ENST00000303406 C10orf142B7Z368 130 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 SAP18O00422 153 aaKnown RBP18.58■□□□□ 0.56
HOXC4-201ENST00000303406 PLPP1O14494 284 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 TNFRSF10CO14798 259 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 SLC31A1O15431 190 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 PRICKLE3O43900 615 aaPredicted RBP18.58■□□□□ 0.56
HOXC4-201ENST00000303406 CLPTM1O96005 669 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 ALPLP05186 524 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 MAT2AP31153 395 aaKnown RBP18.58■□□□□ 0.56
HOXC4-201ENST00000303406 BSGP35613 385 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 ADARB1P78563 741 aaKnown RBP18.58■□□□□ 0.56
HOXC4-201ENST00000303406 GAB1Q13480 694 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 ELOAQ14241 798 aaKnown RBP18.58■□□□□ 0.56
HOXC4-201ENST00000303406 RPE65Q16518 533 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 KCTD21Q4G0X4 260 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 CCNYL2Q5T2Q4 361 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 RNF220Q5VTB9 566 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 TMEM214Q6NUQ4 689 aaKnown RBP18.58■□□□□ 0.56
HOXC4-201ENST00000303406 ABRAXAS1Q6UWZ7 409 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 FAM47BQ8NA70 645 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 OR52N2Q8NGI0 321 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 OR52E1Q8NGJ3 308 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 OR2A1Q8NGT9 310 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 MAGEE2Q8TD90 523 aaPredicted RBP18.58■□□□□ 0.56
HOXC4-201ENST00000303406 WDR92Q96MX6 357 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 SARGQ9BW04 601 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 YTHDF1Q9BYJ9 559 aaKnown RBP18.58■□□□□ 0.56
HOXC4-201ENST00000303406 FGF22Q9HCT0 170 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 TMEM184CQ9NVA4 438 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 COLEC10Q9Y6Z7 277 aa18.58■□□□□ 0.56
HOXC4-201ENST00000303406 LRRC72A6NJI9 287 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 PDZK1P1A8MUH7 402 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 G3V2T6 193 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 H7BY64 318 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 DPM1O60762 260 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 IL3P08700 152 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 DDCP20711 480 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 HNRNPA2B1P22626 353 aaKnown RBP18.57■□□□□ 0.56
HOXC4-201ENST00000303406 TUBA4AP68366 448 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 KRT33BQ14525 404 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 TMEM35AQ53FP2 167 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 CYBRD1Q53TN4 286 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 FOXB2Q5VYV0 432 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 IYDQ6PHW0 289 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 TBPL2Q6SJ96 375 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 PATL1Q86TB9 770 aaKnown RBP18.57■□□□□ 0.56
HOXC4-201ENST00000303406 NUDT13Q86X67 352 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 HIPK1Q86Z02 1210 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 SLC44A3Q8N4M1 653 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 PJA1Q8NG27 643 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 RGMAQ96B86 450 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 RMND5BQ96G75 393 aaPredicted RBP18.57■□□□□ 0.56
HOXC4-201ENST00000303406 PRAP1Q96NZ9 151 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 RBM4BQ9BQ04 359 aaKnown RBP18.57■□□□□ 0.56
HOXC4-201ENST00000303406 RBM4Q9BWF3 364 aaKnown RBP18.57■□□□□ 0.56
HOXC4-201ENST00000303406 FZD3Q9NPG1 666 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 TAS2R9Q9NYW1 312 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 SPASTQ9UBP0 616 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 PCOLCE2Q9UKZ9 415 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 MMP17Q9ULZ9 603 aa18.57■□□□□ 0.56
HOXC4-201ENST00000303406 PLEKHM1Q9Y4G2 1056 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms