RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 NARSO43776 548 aaKnown RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 UNGP13051 313 aaPredicted RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 NPRL3Q12980 569 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 ADRM1Q16186 407 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 ERI1Q8IV48 349 aaKnown RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 FRMD1Q8N878 549 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 DMRTB1Q96MA1 342 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 MFRPQ9BY79 579 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 PIGUQ9H490 435 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 C13orf42A0A1B0GVH6 325 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 ANGPTL1O95841 491 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 PAX7P23759 505 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 CXCL12P48061 93 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 NSDHLQ15738 373 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 FCRL5Q96RD9 977 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 ACSL6Q9UKU0 697 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 RARRES3Q9UL19 164 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 SIT1Q9Y3P8 196 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 G6PDP11413 515 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 CAPGP40121 348 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 WDR5P61964 334 aaKnown RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 RASGEF1BQ0VAM2 473 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 GALNT1Q10472 559 aaPredicted RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 FBXL16Q8N461 479 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 OR2T34Q8NGX1 318 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 OR2T3Q8NH03 318 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 HPS1Q92902 700 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 ZNF184Q99676 751 aaPredicted RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 PIP5K1AQ99755 562 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 PTGES2Q9H7Z7 377 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 EFCAB7A8K855 629 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 BHMG1C9JSJ3 638 aaPredicted RBP7.53□□□□□ -1.2
SCN9A-201ENST00000303354 STC2O76061 302 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 DSC1Q08554 894 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 PTCRAQ6ISU1 281 aaPredicted RBP7.53□□□□□ -1.2
SCN9A-201ENST00000303354 ARCQ7LC44 396 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 KRTCAP2Q8N6L1 136 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 OR9I1Q8NGQ6 314 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 NPRL2Q8WTW4 380 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 FRS2Q8WU20 508 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 ASB15Q8WXK1 588 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 TESCQ96BS2 214 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 PGM2Q96G03 612 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 BOCQ9BWV1 1114 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 SORBS1Q9BX66 1292 aaKnown RBP7.53□□□□□ -1.2
SCN9A-201ENST00000303354 MAN2B1O00754 1011 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 IFI30P13284 250 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 DSC3Q14574 896 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 RFTN1Q14699 578 aaPredicted RBP7.53□□□□□ -1.2
SCN9A-201ENST00000303354 FRG2Q64ET8 278 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 LRFN4Q6PJG9 635 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 RNF111Q6ZNA4 994 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 LIX1LQ8IVB5 337 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 LRRC17Q8N6Y2 441 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 OR10G2Q8NGC3 310 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 FRG2BQ96QU4 278 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 R3HDMLQ9H3Y0 253 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 SIX2Q9NPC8 291 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 SPIN1Q9Y657 262 aaPredicted RBP7.53□□□□□ -1.2
SCN9A-201ENST00000303354 FAM234BA2RU67 622 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 THRBP10828 461 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 PVRP15151 417 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 EPHA4P54764 986 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.53□□□□□ -1.2
SCN9A-201ENST00000303354 DENND6BQ8NEG7 585 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 DPH7Q9BTV6 452 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 C1orf21Q9H246 121 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 DLGAP4Q9Y2H0 992 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 PEAK1Q9H792 1746 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 TRBC2A0A5B9 178 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 EFCAB9A8MZ26 197 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 DOK2O60496 412 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 P04436 131 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 APEHP13798 732 aaKnown RBP7.53□□□□□ -1.2
SCN9A-201ENST00000303354 PTX3P26022 381 aaPredicted RBP7.53□□□□□ -1.2
SCN9A-201ENST00000303354 P2RY2P41231 377 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 S100A10P60903 97 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 PTGES3Q15185 160 aaKnown RBP7.53□□□□□ -1.2
SCN9A-201ENST00000303354 PLGLAQ15195 96 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.53□□□□□ -1.21e-6■■■□□ 18.3
SCN9A-201ENST00000303354 CBR4Q8N4T8 237 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 AADATQ8N5Z0 425 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 LRMDAQ9H2I8 198 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 COQ10BQ9H8M1 238 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 SIX4Q9UIU6 781 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 PITPNM1O00562 1244 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 MTRF1O75570 445 aaKnown RBP7.53□□□□□ -1.2
SCN9A-201ENST00000303354 IRF2P14316 349 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 TMEM11P17152 192 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 PPP1R3AQ16821 1122 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 EEF1A1P5Q5VTE0 462 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 MFSD5Q6N075 450 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 ASPGQ86U10 573 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 NUP43Q8NFH3 380 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 PPP1R14BQ96C90 147 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 TUBGCP5Q96RT8 1024 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 HINT2Q9BX68 163 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 CALML5Q9NZT1 146 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 AP3M1Q9Y2T2 418 aa7.53□□□□□ -1.2
SCN9A-201ENST00000303354 SPATA31D1Q6ZQQ2 1576 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms