RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 TMEM225Q6GV28 225 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 MOB2Q70IA6 237 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 ARL14Q8N4G2 192 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 MSANTD3Q96H12 275 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 TMEM80Q96HE8 168 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 PBDC1Q9BVG4 233 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 TTTY10Q9BZA0 68 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 KCNMB3Q9NPA1 279 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 EPHA6Q9UF33 1036 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 PCDHA2Q9Y5H9 948 aa10.08□□□□□ -0.8
CLIP1-201ENST00000302528 KNDC1Q76NI1 1749 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 C1orf167Q5SNV9 1468 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 SLC7A4O43246 635 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 TREHO43280 583 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 DLSTP36957 453 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 ALDH3B1P43353 468 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 SOX2P48431 317 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 EEFSECP57772 596 aaKnown RBP10.07□□□□□ -0.8
CLIP1-201ENST00000302528 RHDQ02161 417 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 PLGLAQ15195 96 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 KCTD19Q17RG1 926 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-201ENST00000302528 C2orf27AQ580R0 203 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 TATDN1Q6P1N9 297 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 SLC36A4Q6YBV0 504 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 NFKBIDQ8NI38 313 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 DENND1AQ8TEH3 1009 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 SETD7Q8WTS6 366 aaKnown RBP10.07□□□□□ -0.8
CLIP1-201ENST00000302528 ARNTL2Q8WYA1 636 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 CDK15Q96Q40 435 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 DNTTIP1Q9H147 329 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 PCYT1BQ9Y5K3 369 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-201ENST00000302528 A0A0A6YYH2 397 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 hCG_1807616A0A1W2PRN6 198 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 A6NJ64 397 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 ZNF850A8MQ14 1090 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 NPIPA2E9PIF3 369 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 NPIPA3F8WFD2 350 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 CBLP22681 906 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 CD97P48960 835 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 KHDC1Q4VXA5 237 aaKnown RBP10.07□□□□□ -0.8
CLIP1-201ENST00000302528 SWT1Q5T5J6 900 aaKnown RBP10.07□□□□□ -0.8
CLIP1-201ENST00000302528 OR2T5Q6IEZ7 315 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 GDF6Q6KF10 455 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-201ENST00000302528 FUT10Q6P4F1 479 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 FITM2Q8N6M3 262 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 ZSCAN1Q8NBB4 408 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 OR2T29Q8NH02 315 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 PYCR2Q96C36 320 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 MALSU1Q96EH3 234 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 CYP2S1Q96SQ9 504 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 ATG5Q9H1Y0 275 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 ZNF705FA8MVS1 300 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-201ENST00000302528 DLGAP1O14490 977 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 CLN5O75503 358 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 ZNF705DP0CH99 300 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-201ENST00000302528 ZNF705BP0CI00 300 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-201ENST00000302528 SEMG2Q02383 582 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 SGCAQ16586 387 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 SLC9B2Q86UD5 537 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 LHFPL3Q86UP9 236 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 CCDC28AQ8IWP9 274 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 SLC15A3Q8IY34 581 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 RCBTB1Q8NDN9 531 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 OR6Q1Q8NGQ2 317 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 ZNF641Q96N77 438 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-201ENST00000302528 PURBQ96QR8 312 aaKnown RBP10.07□□□□□ -0.8
CLIP1-201ENST00000302528 POLDIP3Q9BY77 421 aaKnown RBP10.07□□□□□ -0.8
CLIP1-201ENST00000302528 PCDHAC1Q9H158 963 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 ZNF358Q9NW07 568 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 DLG5Q8TDM6 1919 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 A0A1B0GV50 99 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 AQP12BA6NM10 295 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 IRF6O14896 467 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 TPPPO94811 219 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 STATHP02808 62 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 H2BFMP0C1H6 154 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 L1CAMP32004 1257 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 PPIGQ13427 754 aaKnown RBP eCLIP10.07□□□□□ -0.82e-7■□□□□ 8.5
CLIP1-201ENST00000302528 PDGFRLQ15198 375 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 SSX2Q16385 188 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 CARD16Q5EG05 197 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 FAM83HQ6ZRV2 1179 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-201ENST00000302528 TAS1R3Q7RTX0 852 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 ERI1Q8IV48 349 aaKnown RBP10.07□□□□□ -0.8
CLIP1-201ENST00000302528 AQP12AQ8IXF9 295 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 WFIKKN2Q8TEU8 576 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 ALG3Q92685 438 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 SDCBP2Q9H190 292 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 TFB2MQ9H5Q4 396 aaKnown RBP10.07□□□□□ -0.8
CLIP1-201ENST00000302528 BCAS3Q9H6U6 928 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 TAS2R1Q9NYW7 299 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 PCTPQ9UKL6 214 aa10.07□□□□□ -0.8
CLIP1-201ENST00000302528 UBE2J1Q9Y385 318 aaPredicted RBP10.07□□□□□ -0.8
CLIP1-201ENST00000302528 A0A0U1RQJ8 604 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 CREBL2O60519 120 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-201ENST00000302528 SLC19A2O60779 497 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 RBBP9O75884 186 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 AMY2BP19961 511 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 CDK6Q00534 326 aa10.06□□□□□ -0.8
CLIP1-201ENST00000302528 HMGCS1Q01581 520 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms