RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 AP3S1Q92572 193 aa13.34□□□□□ -0.27
KARS-201ENST00000302445 TPD52L3Q96J77 140 aa13.34□□□□□ -0.27
KARS-201ENST00000302445 MAP6Q96JE9 813 aa13.34□□□□□ -0.27
KARS-201ENST00000302445 HYLS1Q96M11 299 aa13.34□□□□□ -0.27
KARS-201ENST00000302445 TSSK3Q96PN8 268 aa13.34□□□□□ -0.27
KARS-201ENST00000302445 VPS35Q96QK1 796 aa13.34□□□□□ -0.27
KARS-201ENST00000302445 MND1Q9BWT6 205 aa13.34□□□□□ -0.27
KARS-201ENST00000302445 SLC25A19Q9HC21 320 aa13.34□□□□□ -0.27
KARS-201ENST00000302445 PAK6Q9NQU5 681 aaPredicted RBP13.34□□□□□ -0.27
KARS-201ENST00000302445 EIF3KQ9UBQ5 218 aaKnown RBP13.34□□□□□ -0.27
KARS-201ENST00000302445 NDOR1Q9UHB4 597 aa13.34□□□□□ -0.27
KARS-201ENST00000302445 SSR3Q9UNL2 185 aa13.34□□□□□ -0.27
KARS-201ENST00000302445 MRPL42Q9Y6G3 142 aaKnown RBP13.34□□□□□ -0.27
KARS-201ENST00000302445 SLC12A8A0AV02 714 aa13.33□□□□□ -0.28
KARS-201ENST00000302445 FABP12A6NFH5 140 aa13.33□□□□□ -0.28
KARS-201ENST00000302445 LEUTXA8MZ59 168 aa13.33□□□□□ -0.28
KARS-201ENST00000302445 NFKBIEO00221 500 aa13.33□□□□□ -0.28
KARS-201ENST00000302445 STK16O75716 305 aa13.33□□□□□ -0.28
KARS-201ENST00000302445 PDYNP01213 254 aa13.33□□□□□ -0.28
KARS-201ENST00000302445 KIR2DL3P43628 341 aa13.33□□□□□ -0.28
KARS-201ENST00000302445 HMGA2P52926 109 aa13.33□□□□□ -0.28
KARS-201ENST00000302445 SNRPGP62308 76 aaKnown RBP13.33□□□□□ -0.28
KARS-201ENST00000302445 MAB21L1Q13394 359 aa13.33□□□□□ -0.28
KARS-201ENST00000302445 NCF4Q15080 339 aa13.33□□□□□ -0.28
KARS-201ENST00000302445 TAB1Q15750 504 aa13.33□□□□□ -0.28
KARS-201ENST00000302445 IFI44LQ53G44 452 aa13.33□□□□□ -0.28
KARS-201ENST00000302445 PTRHD1Q6GMV3 140 aaKnown RBP13.33□□□□□ -0.28
KARS-201ENST00000302445 GRAMD2AQ8IUY3 354 aa13.33□□□□□ -0.28
KARS-201ENST00000302445 UTP15Q8TED0 518 aaKnown RBP13.33□□□□□ -0.28
KARS-201ENST00000302445 SLC32A1Q9H598 525 aa13.33□□□□□ -0.28
KARS-201ENST00000302445 TIGARQ9NQ88 270 aa13.33□□□□□ -0.28
KARS-201ENST00000302445 RBFOX1Q9NWB1 397 aaKnown RBP13.33□□□□□ -0.28
KARS-201ENST00000302445 CACNG4Q9UBN1 327 aa13.33□□□□□ -0.28
KARS-201ENST00000302445 BTNL2Q9UIR0 455 aa13.33□□□□□ -0.28
KARS-201ENST00000302445 TDRD15B5MCY1 1934 aaKnown RBP13.33□□□□□ -0.28
KARS-201ENST00000302445 KCNE1BA0A087WTH5 132 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 ANKRD66B4E2M5 251 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 SCAMP3O14828 347 aaKnown RBP13.32□□□□□ -0.28
KARS-201ENST00000302445 BET1O15155 118 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 SLC43A1O75387 559 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 CCNYL3P0C7X3 344 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 COL6A1P12109 1028 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 AMD1P17707 334 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 MAP2K3P46734 347 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 CRYBA2P53672 197 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 WNT3P56703 355 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 IRF5Q13568 498 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 RIN1Q13671 783 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 DSC3Q14574 896 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 TATDN3Q17R31 274 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 LYPLAL1Q5VWZ2 237 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 TSEN54Q7Z6J9 526 aaKnown RBP13.32□□□□□ -0.28
KARS-201ENST00000302445 RBFAQ8N0V3 343 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 NATD1Q8N6N6 113 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 C11orf65Q8NCR3 313 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 FAM46DQ8NEK8 389 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 TRPM4Q8TD43 1214 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 UBASH3BQ8TF42 649 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 UROC1Q96N76 676 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 ABHD16BQ9H3Z7 469 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 ELOVL6Q9H5J4 265 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 TPT1P8Q9HAU6 139 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 EXOSC4Q9NPD3 245 aaKnown RBP13.32□□□□□ -0.28
KARS-201ENST00000302445 PTTG3PQ9NZH4 202 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 KLHL42Q9P2K6 505 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 FTSJ1Q9UET6 329 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 HCN4Q9Y3Q4 1203 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 PCDHGB7Q9Y5F8 929 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 ARL5CA6NH57 179 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 TMEM229AB2RXF0 380 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 GUCA1CO95843 209 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 ANXA5P08758 320 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 CBSLP0DN79 551 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 CYP2A6P11509 494 aaPredicted RBP13.32□□□□□ -0.28
KARS-201ENST00000302445 AZGP1P25311 298 aaKnown RBP13.32□□□□□ -0.28
KARS-201ENST00000302445 CBSP35520 551 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 LIMS1P48059 325 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 CLDN20P56880 219 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 SPHARQ15513 63 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 BTBD16Q32M84 506 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 SGO1Q5FBB7 561 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 CAMKMTQ7Z624 323 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 L3MBTL4Q8NA19 623 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 PROKR2Q8NFJ6 384 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 KLHL6Q8WZ60 621 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 FUBP3Q96I24 572 aaKnown RBP eCLIP13.32□□□□□ -0.28
KARS-201ENST00000302445 UCK2Q9BZX2 261 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 CIPCQ9C0C6 399 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.32□□□□□ -0.28
KARS-201ENST00000302445 MIXL1Q9H2W2 232 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 LATS2Q9NRM7 1088 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 TMPRSS11EQ9UL52 423 aa13.32□□□□□ -0.28
KARS-201ENST00000302445 TRPM7Q96QT4 1865 aa13.31□□□□□ -0.28
KARS-201ENST00000302445 CASTOR2A6NHX0 329 aa13.31□□□□□ -0.28
KARS-201ENST00000302445 PLA2G10O15496 165 aa13.31□□□□□ -0.28
KARS-201ENST00000302445 TPST2O60704 377 aa13.31□□□□□ -0.28
KARS-201ENST00000302445 CYP17A1P05093 508 aa13.31□□□□□ -0.28
KARS-201ENST00000302445 CBLP22681 906 aa13.31□□□□□ -0.28
KARS-201ENST00000302445 TACR1P25103 407 aa13.31□□□□□ -0.28
KARS-201ENST00000302445 SLC9A3P48764 834 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms