RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 GPSM1Q86YR5 675 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 OR52H1Q8NGJ2 320 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 FBLIM1Q8WUP2 373 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 CXorf58Q96LI9 332 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 SAP130Q9H0E3 1048 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 IPPKQ9H8X2 491 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 POLMQ9NP87 494 aaPredicted RBP13.9□□□□□ -0.18
CDT1-201ENST00000301019 COPS3Q9UNS2 423 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 MGAMO43451 1857 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 A0A0A6YYJ9 748 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 ALPPP05187 535 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 KIAA1024LP59773 190 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 DCDC1P59894 354 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 SPIBQ01892 262 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 MBTPS1Q14703 1052 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 ALFQ53S48 1182 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 RANBP10Q6VN20 620 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 LRRC17Q8N6Y2 441 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 ZNF655Q8N720 491 aaPredicted RBP13.9□□□□□ -0.18
CDT1-201ENST00000301019 SGTBQ96EQ0 304 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 NTMT1Q9BV86 223 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 FZD8Q9H461 694 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 NSUN3Q9H649 340 aaKnown RBP13.9□□□□□ -0.18
CDT1-201ENST00000301019 LIN7BQ9HAP6 207 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 HHATLQ9HCP6 504 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 TLR8Q9NR97 1041 aaKnown RBP13.9□□□□□ -0.18
CDT1-201ENST00000301019 NUDT15Q9NV35 164 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 PAHP00439 452 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 GDI2P50395 445 aaKnown RBP13.89□□□□□ -0.19
CDT1-201ENST00000301019 TPMTP51580 245 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 AGFG1P52594 562 aaKnown RBP13.89□□□□□ -0.19
CDT1-201ENST00000301019 CXCR4P61073 352 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 RPS7P62081 194 aaKnown RBP13.89□□□□□ -0.19
CDT1-201ENST00000301019 DEFA5Q01523 94 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 CSTF1Q05048 431 aaKnown RBP13.89□□□□□ -0.19
CDT1-201ENST00000301019 ELOAQ14241 798 aaKnown RBP13.89□□□□□ -0.19
CDT1-201ENST00000301019 ATCAYQ86WG3 371 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 TMEM145Q8NBT3 493 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 GPR150Q8NGU9 434 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 NXF3Q9H4D5 531 aaKnown RBP13.89□□□□□ -0.19
CDT1-201ENST00000301019 ELP3Q9H9T3 547 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 ING4Q9UNL4 249 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 PADI2Q9Y2J8 665 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 ZNF98A6NK75 572 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 TNFRSF11BO00300 401 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 RFXANKO14593 260 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 ALPIP09923 528 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 ACSM4P0C7M7 580 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 CSTF3Q12996 717 aaKnown RBP13.89□□□□□ -0.19
CDT1-201ENST00000301019 XKR7Q5GH72 579 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 SLC6A19Q695T7 634 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 ALKAL2Q6UX46 152 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 KIAA0907Q7Z7F0 614 aaPredicted RBP13.89□□□□□ -0.19
CDT1-201ENST00000301019 SETD6Q8TBK2 473 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 PIH1D2Q8WWB5 315 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 FCGR1BQ92637 280 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 HYLS1Q96M11 299 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 OPALINQ96PE5 141 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 TTYH1Q9H313 450 aaPredicted RBP13.89□□□□□ -0.19
CDT1-201ENST00000301019 GHITMQ9H3K2 345 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 RANBP3Q9H6Z4 567 aaPredicted RBP13.89□□□□□ -0.19
CDT1-201ENST00000301019 NANSQ9NR45 359 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 FBXL2Q9UKC9 423 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 BAIAP2Q9UQB8 552 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 DLGAP4Q9Y2H0 992 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 SCN4AP35499 1836 aa13.89□□□□□ -0.19
CDT1-201ENST00000301019 MAFKO60675 156 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 CPN2P22792 545 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 NUP62P37198 522 aaPredicted RBP13.88□□□□□ -0.19
CDT1-201ENST00000301019 DDX39BQ13838 428 aaKnown RBP13.88□□□□□ -0.19
CDT1-201ENST00000301019 HKDC1Q2TB90 917 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 KIAA0319Q5VV43 1072 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 FAM180BQ6P0A1 224 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 ZNF782Q6ZMW2 699 aaPredicted RBP13.88□□□□□ -0.19
CDT1-201ENST00000301019 TAGAPQ8N103 731 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 OR8J3Q8NGG0 315 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 KLHL15Q96M94 604 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 HCN3Q9P1Z3 774 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 ZNF624Q9P2J8 865 aaPredicted RBP13.88□□□□□ -0.19
CDT1-201ENST00000301019 FBXW11Q9UKB1 542 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 EXO1Q9UQ84 846 aaKnown RBP13.88□□□□□ -0.19
CDT1-201ENST00000301019 TNFSF13BQ9Y275 285 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 KIAA1217Q5T5P2 1943 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 LCHNA4D1U4 455 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 B4GALT3O60512 393 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 NDUFS3O75489 264 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 PRAMEF1O95521 474 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 DRD5P21918 477 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 HMGCLP35914 325 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 ASAH1Q13510 395 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 SLC39A12Q504Y0 691 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 SIRPB2Q5JXA9 342 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 OR2G6Q5TZ20 316 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 WSCD1Q658N2 575 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 ZDHHC17Q8IUH5 632 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 CLECL1Q8IZS7 167 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 DPP10Q8N608 796 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 GDPD1Q8N9F7 314 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 HMGB4Q8WW32 186 aa13.88□□□□□ -0.19
CDT1-201ENST00000301019 NARS2Q96I59 477 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms