RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 EXD2Q9NVH0 621 aa21.09■□□□□ 0.97
TPM4-201ENST00000300933 BRWD1Q9NSI6 2320 aa21.09■□□□□ 0.97
TPM4-201ENST00000300933 DOCK8Q8NF50 2099 aa21.08■□□□□ 0.97
TPM4-201ENST00000300933 KNL1Q8NG31 2342 aa21.08■□□□□ 0.97
TPM4-201ENST00000300933 CLIC1O00299 241 aa21.08■□□□□ 0.97
TPM4-201ENST00000300933 SCN2BO60939 215 aa21.08■□□□□ 0.97
TPM4-201ENST00000300933 HTR1AP08908 422 aa21.08■□□□□ 0.97
TPM4-201ENST00000300933 NUDT7P0C024 238 aa21.08■□□□□ 0.97
TPM4-201ENST00000300933 THRBP10828 461 aa21.08■□□□□ 0.97
TPM4-201ENST00000300933 PRPS1L1P21108 318 aa21.08■□□□□ 0.97
TPM4-201ENST00000300933 AGXTP21549 392 aa21.08■□□□□ 0.97
TPM4-201ENST00000300933 TAP2Q03519 686 aa21.08■□□□□ 0.97
TPM4-201ENST00000300933 RUNX3Q13761 415 aa21.08■□□□□ 0.97
TPM4-201ENST00000300933 OR4K1Q8NGD4 311 aa21.08■□□□□ 0.97
TPM4-201ENST00000300933 SORBS1Q9BX66 1292 aaKnown RBP21.08■□□□□ 0.97
TPM4-201ENST00000300933 TOR3AQ9H497 397 aa21.08■□□□□ 0.97
TPM4-201ENST00000300933 SFXN1Q9H9B4 322 aa21.08■□□□□ 0.97
TPM4-201ENST00000300933 POU2F3Q9UKI9 436 aa21.08■□□□□ 0.97
TPM4-201ENST00000300933 H0YIV9 168 aa21.08■□□□□ 0.96
TPM4-201ENST00000300933 DEAF1O75398 565 aaPredicted RBP21.08■□□□□ 0.96
TPM4-201ENST00000300933 GSTM2P28161 218 aa21.08■□□□□ 0.96
TPM4-201ENST00000300933 VAC14Q08AM6 782 aa21.08■□□□□ 0.96
TPM4-201ENST00000300933 GTF2H3Q13889 308 aa21.08■□□□□ 0.96
TPM4-201ENST00000300933 CAPN13Q6MZZ7 669 aaPredicted RBP21.08■□□□□ 0.96
TPM4-201ENST00000300933 C11orf96Q7Z7L8 435 aa21.08■□□□□ 0.96
TPM4-201ENST00000300933 C8orf59Q8N0T1 100 aaPredicted RBP21.08■□□□□ 0.96
TPM4-201ENST00000300933 PPP1R16AQ96I34 528 aa21.08■□□□□ 0.96
TPM4-201ENST00000300933 CCDC115Q96NT0 180 aa21.08■□□□□ 0.96
TPM4-201ENST00000300933 ZNF639Q9UID6 485 aa21.08■□□□□ 0.96
TPM4-201ENST00000300933 MAN2B2Q9Y2E5 1009 aa21.08■□□□□ 0.96
TPM4-201ENST00000300933 HOXB9P17482 250 aaPredicted RBP21.07■□□□□ 0.96
TPM4-201ENST00000300933 HNF4AP41235 474 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 ALDH3A2P51648 485 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 ERVK-21P61565 698 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 CSTF3Q12996 717 aaKnown RBP21.07■□□□□ 0.96
TPM4-201ENST00000300933 DPY19L1Q2PZI1 675 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 INAVAQ3KP66 663 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 CCDC80Q76M96 950 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 AADATQ8N5Z0 425 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 UGT2B28Q9BY64 529 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 ZDHHC5Q9C0B5 715 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 SLC6A17Q9H1V8 727 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 SIAEQ9HAT2 523 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 MBNL1Q9NR56 388 aaKnown RBP21.07■□□□□ 0.96
TPM4-201ENST00000300933 DCAF13Q9NV06 445 aaKnown RBP21.07■□□□□ 0.96
TPM4-201ENST00000300933 MYO1DO94832 1006 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 AQP1P29972 269 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 DRD3P35462 400 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 DAG1Q14118 895 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 PDGFRLQ15198 375 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 PAGE2BQ5JRK9 111 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 ATG9BQ674R7 924 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 SPESP1Q6UW49 350 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 CALHM3Q86XJ0 350 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 OR9A1PQ8NGU1 263 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 MAL2Q969L2 176 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 RUVBL1Q9Y265 456 aaKnown RBP21.07■□□□□ 0.96
TPM4-201ENST00000300933 MYO15AQ9UKN7 3530 aa21.07■□□□□ 0.96
TPM4-201ENST00000300933 NUP210Q8TEM1 1887 aaPredicted RBP21.06■□□□□ 0.96
TPM4-201ENST00000300933 PAK4O96013 591 aaPredicted RBP21.06■□□□□ 0.96
TPM4-201ENST00000300933 ALPLP05186 524 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 PCYT1AP49585 367 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 VASPP50552 380 aaPredicted RBP21.06■□□□□ 0.96
TPM4-201ENST00000300933 SKIV2LQ15477 1246 aaKnown RBP21.06■□□□□ 0.96
TPM4-201ENST00000300933 DUOXA1Q1HG43 343 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 PIP5KL1Q5T9C9 394 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 MED27Q6P2C8 311 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 WDR48Q8TAF3 677 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 NELL1Q92832 810 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 FGF14Q92915 247 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 ZCCHC2Q9C0B9 1178 aaKnown RBP21.06■□□□□ 0.96
TPM4-201ENST00000300933 UGDHO60701 494 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 TPTEP56180 551 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 TAS2R38P59533 333 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 BCL7AQ4VC05 210 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 PARM1Q6UWI2 310 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 ARMCX6Q7L4S7 300 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 VTCN1Q7Z7D3 282 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 GPR149Q86SP6 731 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 MMP21Q8N119 569 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 SDCCAG3Q96C92 435 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 MAGED4Q96JG8 741 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 MYOCQ99972 504 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 AASDHPPTQ9NRN7 309 aa21.06■□□□□ 0.96
TPM4-201ENST00000300933 G3V2T6 193 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 PIGAP37287 484 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 EIF4HQ15056 248 aaKnown RBP21.05■□□□□ 0.96
TPM4-201ENST00000300933 INAQ16352 499 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 WSCD2Q2TBF2 565 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 DEPDC1Q5TB30 811 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 ANGPTL8Q6UXH0 198 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 ARL10Q8N8L6 244 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 C11orf24Q96F05 449 aaPredicted RBP21.05■□□□□ 0.96
TPM4-201ENST00000300933 DUSP26Q9BV47 211 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 TMEM121BQ9BXQ6 578 aaPredicted RBP21.05■□□□□ 0.96
TPM4-201ENST00000300933 NKX2-4Q9H2Z4 354 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 AKIP1Q9NQ31 210 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 EXO1Q9UQ84 846 aaKnown RBP21.05■□□□□ 0.96
TPM4-201ENST00000300933 A0A1W2PP55 124 aa21.05■□□□□ 0.96
TPM4-201ENST00000300933 MGAT4DA6NG13 374 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms