RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 SOX9P48436 509 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 NCS1P62166 190 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 GRIK2Q13002 908 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 SLBPQ14493 270 aaKnown RBP eCLIP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 UAP1L1Q3KQV9 507 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 HENMT1Q5T8I9 393 aaKnown RBP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 TTC23LQ6PF05 361 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 LRRC70Q7Z2Q7 622 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 HMGN2P46Q86SG4 172 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 PTRH1Q86Y79 214 aaKnown RBP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 TSPEARQ8WU66 669 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 ARRDC3Q96B67 414 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 ZSCAN5AQ9BUG6 496 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 UGT2B28Q9BY64 529 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 PRRG3Q9BZD7 231 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 SPNS1Q9H2V7 528 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 KAT8Q9H7Z6 458 aaKnown RBP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 RASSF1Q9NS23 344 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 CNOT11Q9UKZ1 510 aaKnown RBP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 ABCG2Q9UNQ0 655 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 CAB39Q9Y376 341 aaPredicted RBP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 OR1A2Q9Y585 309 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 HEPACAM2A8MVW5 462 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 TTKP33981 857 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 OR1E2P47887 323 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 CLDN8P56748 225 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 CNTN1Q12860 1018 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 UGT8Q16880 541 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 RUNDC3AQ59EK9 446 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 FAM78AQ5JUQ0 283 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 CHPFQ8IZ52 775 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 LILRB1Q8NHL6 650 aaPredicted RBP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 ZNF420Q8TAQ5 688 aaPredicted RBP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 RAB2BQ8WUD1 216 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 ZNF480Q8WV37 535 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 JPH3Q8WXH2 748 aaPredicted RBP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 RPL3LQ92901 407 aaKnown RBP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 CIDECQ96AQ7 238 aaPredicted RBP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 OTUB1Q96FW1 271 aaPredicted RBP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 MACROD1Q9BQ69 325 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 CCM2Q9BSQ5 444 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 RDH14Q9HBH5 336 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 AMBNQ9NP70 447 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 CRNNQ9UBG3 495 aaPredicted RBP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 KCNE2Q9Y6J6 123 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 PCM1Q15154 2024 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 PCP4L1A6NKN8 68 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 AGAP14A8MT82 685 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 EPN2O95208 641 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 INHBBP09529 407 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 CBSLP0DN79 551 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 DBTP11182 482 aaKnown RBP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 PSMB5P28074 263 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 FMO3P31513 532 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 CBSP35520 551 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 LBX1P52954 281 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 RACK1P63244 317 aaKnown RBP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 EPS8Q12929 822 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 KCNAB2Q13303 367 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 DAG1Q14118 895 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 SUZ12Q15022 739 aaKnown RBP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 INTS11Q5TA45 600 aaKnown RBP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 ZDHHC21Q8IVQ6 265 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 OR7G3Q8NG95 312 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 OR5AR1Q8NGP9 310 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 CNIH3Q8TBE1 160 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 SPPL2AQ8TCT8 520 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 ZNF347Q96SE7 839 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 RERGLQ9H628 205 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 SERHLQ9NQF3 203 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 MAP4K5Q9Y4K4 846 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 TRPM6Q9BX84 2022 aa9.71□□□□□ -0.85
FOXN4-201ENST00000299162 ARNTLO00327 626 aa9.71□□□□□ -0.85
FOXN4-201ENST00000299162 IDH3BO43837 385 aa9.71□□□□□ -0.85
FOXN4-201ENST00000299162 EFCAB14O75071 495 aa9.71□□□□□ -0.85
FOXN4-201ENST00000299162 CCNKO75909 580 aa9.71□□□□□ -0.85
FOXN4-201ENST00000299162 FADS2O95864 444 aaKnown RBP9.71□□□□□ -0.85
FOXN4-201ENST00000299162 MMP12P39900 470 aa9.71□□□□□ -0.85
FOXN4-201ENST00000299162 OXA1LQ15070 435 aa9.71□□□□□ -0.85
FOXN4-201ENST00000299162 SMU1Q2TAY7 513 aa9.71□□□□□ -0.85
FOXN4-201ENST00000299162 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.71□□□□□ -0.85
FOXN4-201ENST00000299162 ZNF852Q6ZMS4 543 aa9.71□□□□□ -0.85
FOXN4-201ENST00000299162 OR8J3Q8NGG0 315 aa9.71□□□□□ -0.85
FOXN4-201ENST00000299162 NELL1Q92832 810 aa9.71□□□□□ -0.85
FOXN4-201ENST00000299162 EFHD2Q96C19 240 aaPredicted RBP9.71□□□□□ -0.85
FOXN4-201ENST00000299162 NUS1Q96E22 293 aa9.71□□□□□ -0.85
FOXN4-201ENST00000299162 BEX2Q9BXY8 128 aa9.71□□□□□ -0.85
FOXN4-201ENST00000299162 SLC6A17Q9H1V8 727 aa9.71□□□□□ -0.85
FOXN4-201ENST00000299162 THG1LQ9NWX6 298 aaKnown RBP9.71□□□□□ -0.85
FOXN4-201ENST00000299162 VNN3Q9NY84 501 aa9.71□□□□□ -0.85
FOXN4-201ENST00000299162 CDH7Q9ULB5 785 aa9.71□□□□□ -0.85
FOXN4-201ENST00000299162 LAMA1P25391 3075 aa9.71□□□□□ -0.86
FOXN4-201ENST00000299162 TRBV23OR9-2A0A075B6M9 112 aa9.71□□□□□ -0.86
FOXN4-201ENST00000299162 FEZF1A0PJY2 475 aa9.71□□□□□ -0.86
FOXN4-201ENST00000299162 GFYI3L273 518 aa9.71□□□□□ -0.86
FOXN4-201ENST00000299162 TFECO14948 347 aaPredicted RBP9.71□□□□□ -0.86
FOXN4-201ENST00000299162 PAK4O96013 591 aaPredicted RBP9.71□□□□□ -0.86
FOXN4-201ENST00000299162 KLK1P06870 262 aa9.71□□□□□ -0.86
FOXN4-201ENST00000299162 BMP4P12644 408 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms