RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 C19orf60Q96EN9 201 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 MSANTD3Q96H12 275 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 PDLIM5Q96HC4 596 aaKnown RBP6.41□□□□□ -1.38
TMC1-201ENST00000297784 DEPDC7Q96QD5 511 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 FOXQ1Q9C009 403 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 AMBRA1Q9C0C7 1298 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 DUSP21Q9H596 190 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 RUBCNLQ9H714 662 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 SDR39U1Q9NRG7 319 aaPredicted RBP6.41□□□□□ -1.38
TMC1-201ENST00000297784 TMEM45AQ9NWC5 275 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 FKBP14Q9NWM8 211 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 MAGEL2Q9UJ55 1249 aa6.41□□□□□ -1.38
TMC1-201ENST00000297784 TCRBV21S2A2A0A5A6 115 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 CCDC154A6NI56 674 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 A8MT66 165 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 CCRL2O00421 344 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 POLR1CO15160 346 aaPredicted RBP6.4□□□□□ -1.38
TMC1-201ENST00000297784 SHOXO15266 292 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 ZW10O43264 779 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 TBX1O43435 398 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 CD6P30203 668 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 TRIM23P36406 574 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 PRIM2P49643 509 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 ST13P50502 369 aaKnown RBP6.4□□□□□ -1.38
TMC1-201ENST00000297784 TSNQ15631 228 aaKnown RBP6.4□□□□□ -1.38
TMC1-201ENST00000297784 CARTPTQ16568 116 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 ZNF284Q2VY69 593 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 ZFP69Q49AA0 526 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 VPS26BQ4G0F5 336 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 PRR23BQ6ZRT6 265 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 C11orf96Q7Z7L8 435 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 CCDC28AQ8IWP9 274 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 GALNT12Q8IXK2 581 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 FLCNQ8NFG4 579 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 CXorf40AQ8TE69 158 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 KLK6Q92876 244 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 KIAA1191Q96A73 305 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 ULK4Q96C45 1275 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 LGALS12Q96DT0 336 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 L3HYPDHQ96EM0 354 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 ST6GAL2Q96JF0 529 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 RBM4BQ9BQ04 359 aaKnown RBP6.4□□□□□ -1.38
TMC1-201ENST00000297784 TMEM246Q9BRR3 403 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 RBM4Q9BWF3 364 aaKnown RBP6.4□□□□□ -1.38
TMC1-201ENST00000297784 C1QTNF2Q9BXJ5 285 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 GSTO2Q9H4Y5 243 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 KAT8Q9H7Z6 458 aaKnown RBP6.4□□□□□ -1.38
TMC1-201ENST00000297784 AKTIPQ9H8T0 292 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 SARS2Q9NP81 518 aaKnown RBP6.4□□□□□ -1.38
TMC1-201ENST00000297784 WNT16Q9UBV4 365 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 CAB39Q9Y376 341 aaPredicted RBP6.4□□□□□ -1.38
TMC1-201ENST00000297784 ASB1Q9Y576 335 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 HSPE1-MOB4S4R3N1 261 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 LRP4O75096 1905 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 CEP192Q8TEP8 1941 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 A0A1W2PP18 115 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 LRRC14BA6NHZ5 514 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 ZSCAN5BA6NJL1 495 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 E5RI56 91 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 CDK2AP1O14519 115 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 VPS26AO75436 327 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 EEDO75530 441 aaKnown RBP6.4□□□□□ -1.38
TMC1-201ENST00000297784 PRKD3O94806 890 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 MFN2O95140 757 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 PCDH8O95206 1070 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 APOA1P02647 267 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 DNTTP04053 509 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 FGF4P08620 206 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 ITGAMP11215 1152 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 AGXTP21549 392 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 TPD52P55327 224 aaPredicted RBP6.4□□□□□ -1.38
TMC1-201ENST00000297784 RACK1P63244 317 aaKnown RBP6.4□□□□□ -1.38
TMC1-201ENST00000297784 EMX2Q04743 252 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 PIGFQ07326 219 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 CAPRIN1Q14444 709 aaKnown RBP6.4□□□□□ -1.38
TMC1-201ENST00000297784 STARD3Q14849 445 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 KIF19Q2TAC6 998 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 RFX4Q33E94 735 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 FBXO48Q5FWF7 155 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 PTRHD1Q6GMV3 140 aaKnown RBP6.4□□□□□ -1.38
TMC1-201ENST00000297784 SYT13Q7L8C5 426 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 TRMT11Q7Z4G4 463 aaKnown RBP6.4□□□□□ -1.38
TMC1-201ENST00000297784 ZDHHC13Q8IUH4 622 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 PLD3Q8IV08 490 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 ELMOD2Q8IZ81 293 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 PIP4P2Q8N4L2 257 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 OR14C36Q8NHC7 312 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 JPH3Q8WXH2 748 aaPredicted RBP6.4□□□□□ -1.38
TMC1-201ENST00000297784 SDCCAG3Q96C92 435 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 LINGO1Q96FE5 620 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 SIPA1Q96FS4 1042 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 RNF170Q96K19 258 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 NSMCE2Q96MF7 247 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 GON7Q9BXV9 100 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 IRF2BPLQ9H1B7 796 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 TFB2MQ9H5Q4 396 aaKnown RBP6.4□□□□□ -1.38
TMC1-201ENST00000297784 LMAN1LQ9HAT1 526 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 IL1RL2Q9HB29 575 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 SYTL2Q9HCH5 934 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 GPSM3Q9Y4H4 160 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms