RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 CHIT1Q13231 466 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 TMEM201Q5SNT2 666 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 ZNF517Q6ZMY9 492 aaPredicted RBP18.44■□□□□ 0.54
TRA2A-201ENST00000297071 ADGRG2Q8IZP9 1017 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 HJURPQ8NCD3 748 aaPredicted RBP18.44■□□□□ 0.54
TRA2A-201ENST00000297071 COPS8Q99627 209 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 GDF15Q99988 308 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 GPR62Q9BZJ7 368 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 BHLHE41Q9C0J9 482 aaPredicted RBP18.44■□□□□ 0.54
TRA2A-201ENST00000297071 SLC25A19Q9HC21 320 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 SEC14L4Q9UDX3 406 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 ATP6V1HQ9UI12 483 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 CFAP20Q9Y6A4 193 aaKnown RBP18.44■□□□□ 0.54
TRA2A-201ENST00000297071 ARHGAP33O14559 1287 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 YY2O15391 372 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 TSPAN3O60637 253 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 TNFRSF21O75509 655 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 LGI1O95970 557 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 CXCR2P25025 360 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 MZF1P28698 734 aaPredicted RBP18.44■□□□□ 0.54
TRA2A-201ENST00000297071 NKX2-5P52952 324 aaPredicted RBP18.44■□□□□ 0.54
TRA2A-201ENST00000297071 ARPP19P56211 112 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 ACSM2AQ08AH3 577 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 CARTPTQ16568 116 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 ZFP69Q49AA0 526 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 C6orf183Q5T699 404 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 ATXN7L2Q5T6C5 722 aaPredicted RBP18.44■□□□□ 0.54
TRA2A-201ENST00000297071 ACSM2BQ68CK6 577 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 GRHL2Q6ISB3 625 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 RETSATQ6NUM9 610 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 RSPO2Q6UXX9 243 aaPredicted RBP18.44■□□□□ 0.54
TRA2A-201ENST00000297071 Q6ZPB1 254 aaPredicted RBP18.44■□□□□ 0.54
TRA2A-201ENST00000297071 C16orf59Q7L2K0 433 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 SPPL2AQ8TCT8 520 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 GEMIN6Q8WXD5 167 aaKnown RBP18.44■□□□□ 0.54
TRA2A-201ENST00000297071 LINC01599Q8WXQ3 324 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 TMEM245Q9H330 911 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 ELAC1Q9H777 363 aaKnown RBP18.44■□□□□ 0.54
TRA2A-201ENST00000297071 TMEM184CQ9NVA4 438 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 TMEM161AQ9NX61 479 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 MS4A12Q9NXJ0 267 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 TAS2R9Q9NYW1 312 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 FTSJ1Q9UET6 329 aa18.44■□□□□ 0.54
TRA2A-201ENST00000297071 FCF1Q9Y324 198 aaKnown RBP18.44■□□□□ 0.54
TRA2A-201ENST00000297071 IQCMA0A1B0GVH7 501 aa18.43■□□□□ 0.54
TRA2A-201ENST00000297071 NBNO60934 754 aa18.43■□□□□ 0.54
TRA2A-201ENST00000297071 ADAMTS4O75173 837 aa18.43■□□□□ 0.54
TRA2A-201ENST00000297071 SEMA3DO95025 777 aa18.43■□□□□ 0.54
TRA2A-201ENST00000297071 C1QCP02747 245 aa18.43■□□□□ 0.54
TRA2A-201ENST00000297071 IDSP22304 550 aa18.43■□□□□ 0.54
TRA2A-201ENST00000297071 ITGB7P26010 798 aa18.43■□□□□ 0.54
TRA2A-201ENST00000297071 IDH2P48735 452 aaKnown RBP18.43■□□□□ 0.54
TRA2A-201ENST00000297071 SNRPGP62308 76 aaKnown RBP18.43■□□□□ 0.54
TRA2A-201ENST00000297071 SPIBQ01892 262 aa18.43■□□□□ 0.54
TRA2A-201ENST00000297071 CHRNEQ04844 493 aa18.43■□□□□ 0.54
TRA2A-201ENST00000297071 E2F2Q14209 437 aa18.43■□□□□ 0.54
TRA2A-201ENST00000297071 BCL7AQ4VC05 210 aa18.43■□□□□ 0.54
TRA2A-201ENST00000297071 CRB2Q5IJ48 1285 aa18.43■□□□□ 0.54
TRA2A-201ENST00000297071 C17orf99Q6UX52 265 aa18.43■□□□□ 0.54
TRA2A-201ENST00000297071 Q8N9G6 341 aaPredicted RBP18.43■□□□□ 0.54
TRA2A-201ENST00000297071 OR52N2Q8NGI0 321 aa18.43■□□□□ 0.54
TRA2A-201ENST00000297071 MCCC1Q96RQ3 725 aaPredicted RBP18.43■□□□□ 0.54
TRA2A-201ENST00000297071 SYNDIG1Q9H7V2 258 aa18.43■□□□□ 0.54
TRA2A-201ENST00000297071 MARCH5Q9NX47 278 aa18.43■□□□□ 0.54
TRA2A-201ENST00000297071 CAB39Q9Y376 341 aaPredicted RBP18.43■□□□□ 0.54
TRA2A-201ENST00000297071 HLA-EP13747 358 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 XCR1P46094 333 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 PFN3P60673 137 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 ASAH1Q13510 395 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 TSTQ16762 297 aaKnown RBP18.42■□□□□ 0.54
TRA2A-201ENST00000297071 EXOC3L2Q2M3D2 409 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 SPIN4Q56A73 249 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 TPRG1Q6ZUI0 275 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 GRPEL2Q8TAA5 225 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 KIAA1143Q96AT1 154 aaPredicted RBP18.42■□□□□ 0.54
TRA2A-201ENST00000297071 SH3KBP1Q96B97 665 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 PIP5K1AQ99755 562 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 NIPSNAP1Q9BPW8 284 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 EBPLQ9BY08 206 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 NDEL1Q9GZM8 345 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 RNF167Q9H6Y7 350 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 LSM2Q9Y333 95 aaKnown RBP18.42■□□□□ 0.54
TRA2A-201ENST00000297071 DSPPQ9NZW4 1301 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 GABRR3A8MPY1 467 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 CCNB2O95067 398 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 ALX3O95076 343 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 CST5P28325 142 aaPredicted RBP18.42■□□□□ 0.54
TRA2A-201ENST00000297071 CSTF2P33240 577 aaKnown RBP eCLIP18.42■□□□□ 0.54
TRA2A-201ENST00000297071 RPL3P39023 403 aaKnown RBP18.42■□□□□ 0.54
TRA2A-201ENST00000297071 RORCP51449 518 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 NUDT6P53370 316 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 MVDP53602 400 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 BNC1Q01954 994 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 IRF8Q02556 426 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 NCF4Q15080 339 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 SSX1Q16384 188 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 GCNT6Q5T4J0 391 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 FUT10Q6P4F1 479 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 SPATC1Q76KD6 591 aa18.42■□□□□ 0.54
TRA2A-201ENST00000297071 LIX1LQ8IVB5 337 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms