RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 LRCH3Q96II8 777 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 LINC01553A4QN01 128 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 GLOD5A6NK44 160 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 SNX4O95219 450 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 KLHL26Q53HC5 615 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 CATSPEREQ5SY80 951 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 SLC2A7Q6PXP3 512 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 PACS2Q86VP3 889 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 CROCCP3Q8IVE0 287 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 RHBDD1Q8TEB9 315 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 JPH3Q8WXH2 748 aaPredicted RBP17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 MRPL38Q96DV4 380 aaKnown RBP17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 RAB26Q9ULW5 256 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 TMA7Q9Y2S6 64 aaKnown RBP17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 NOX1Q9Y5S8 564 aa17.09■□□□□ 0.33
CDC42EP3-201ENST00000295324 SRP54P61011 504 aaKnown RBP17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 RAB6CQ53S08 254 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 NOXRED1Q6NXP6 359 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 EPGNQ6UW88 154 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 ANKRD33Q7Z3H0 272 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 OR10H4Q8NGA5 316 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 KCNA7Q96RP8 456 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 ASPNQ9BXN1 380 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 CPEB1Q9BZB8 566 aaKnown RBP17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 RAB6CQ9H0N0 254 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 R3HDMLQ9H3Y0 253 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 TAS2R1Q9NYW7 299 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 ARHGEF33A8MVX0 844 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 KHDRBS3O75525 346 aaKnown RBP17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 SOX30O94993 753 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 PROS1P07225 676 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 NELFEP18615 380 aaKnown RBP17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 ARSDP51689 593 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 POU6F2P78424 691 aaPredicted RBP17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 RASGEF1BQ0VAM2 473 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 TECRLQ5HYJ1 363 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 GPR107Q5VW38 600 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 TMIEQ8NEW7 156 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 APOOQ9BUR5 198 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 RBCK1Q9BYM8 510 aa17.08■□□□□ 0.33
CDC42EP3-201ENST00000295324 ZBTB11O95625 1053 aaPredicted RBP17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 DCTN2Q13561 401 aaKnown RBP17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 NFE2L1Q14494 772 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 LAPTM4BQ86VI4 370 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 CADM1Q9BY67 442 aaKnown RBP17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 WASHC1A8K0Z3 465 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 WASH3PC4AMC7 463 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 OPN1SWP03999 348 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 ATF6P18850 670 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 PYDC2Q56P42 97 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 WASH2PQ6VEQ5 465 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 AHSA2Q719I0 299 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 NANOGNBQ7Z5D8 188 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 MFSD6LQ8IWD5 586 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 KBTBD2Q8IY47 623 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 OR5P2Q8WZ92 322 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 TOE1Q96GM8 510 aaKnown RBP17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 TCHHQ07283 1943 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 KIAA0355O15063 1070 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 S100A9P06702 114 aaKnown RBP17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 OR4D2P58180 307 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 RAB41Q5JT25 222 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 ALKAL1Q6UXT8 129 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 PLD6Q8N2A8 252 aaKnown RBP17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 NFKBIDQ8NI38 313 aa17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.08■□□□□ 0.32
CDC42EP3-201ENST00000295324 SLX4Q8IY92 1834 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 C1orf226A1L170 272 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 NPPAP01160 153 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 ACY1Q03154 408 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 TLR1Q15399 786 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 FAM78AQ5JUQ0 283 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 NXPE4Q6UWF7 544 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 SPPL3Q8TCT6 385 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 GFM1Q96RP9 751 aaKnown RBP17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 HEBP1Q9NRV9 189 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 CPNE3O75131 537 aaKnown RBP17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 ZNF252P-AS1Q0IIN9 211 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 LRP8Q14114 963 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 Q6ZSR6 202 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 TMEM234Q8WY98 164 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 TRIM2Q9C040 744 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 ZBP1Q9H171 429 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 TIA1P31483 386 aaKnown RBP eCLIP17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 GJA4P35212 333 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 PXNP49023 591 aaPredicted RBP17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 CSTF1Q05048 431 aaKnown RBP17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 TCEAL6Q6IPX3 200 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 DPPA4Q7L190 304 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 TP53INP2Q8IXH6 220 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 LGI4Q8N135 537 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 RASGEF1AQ8N9B8 481 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 G6PC3Q9BUM1 346 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 DENND2DQ9H6A0 471 aaPredicted RBP17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 ZNF334Q9HCZ1 680 aaPredicted RBP17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 TMEM184CQ9NVA4 438 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 MYH6P13533 1939 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 NPIPA5E9PKD4 350 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 CD9P21926 228 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 CXorf57Q6NSI4 855 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms