RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 WASH2PQ6VEQ5 465 aa16.14■□□□□ 0.17
CPSF4-201ENST00000292476 CALHM3Q86XJ0 350 aa16.14■□□□□ 0.17
CPSF4-201ENST00000292476 TMBIM1Q969X1 311 aa16.14■□□□□ 0.17
CPSF4-201ENST00000292476 TESCQ96BS2 214 aa16.14■□□□□ 0.17
CPSF4-201ENST00000292476 C12orf66Q96MD2 445 aa16.14■□□□□ 0.17
CPSF4-201ENST00000292476 HBEGFQ99075 208 aa16.14■□□□□ 0.17
CPSF4-201ENST00000292476 GPR174Q9BXC1 333 aa16.14■□□□□ 0.17
CPSF4-201ENST00000292476 NPLQ9BXD5 320 aaPredicted RBP16.14■□□□□ 0.17
CPSF4-201ENST00000292476 FGF22Q9HCT0 170 aa16.14■□□□□ 0.17
CPSF4-201ENST00000292476 WASH6PQ9NQA3 447 aa16.14■□□□□ 0.17
CPSF4-201ENST00000292476 TRNAU1APQ9NX07 287 aaKnown RBP16.14■□□□□ 0.17
CPSF4-201ENST00000292476 CIDEBQ9UHD4 219 aa16.14■□□□□ 0.17
CPSF4-201ENST00000292476 COLEC10Q9Y6Z7 277 aa16.14■□□□□ 0.17
CPSF4-201ENST00000292476 MYO15AQ9UKN7 3530 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 VPS13AQ96RL7 3174 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 IGHV1OR15-9A0A0B4J2B8 117 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 PRR19A6NJB7 356 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 K7ESF4 209 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 FFAR3O14843 346 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 GPR42O15529 346 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 TDGF1P13385 188 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 JUNBP17275 347 aaPredicted RBP16.13■□□□□ 0.17
CPSF4-201ENST00000292476 DCKP27707 260 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 PXNP49023 591 aaPredicted RBP16.13■□□□□ 0.17
CPSF4-201ENST00000292476 TBPL1P62380 186 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 TAP2Q03519 686 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 DMWDQ09019 674 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 DCTN2Q13561 401 aaKnown RBP16.13■□□□□ 0.17
CPSF4-201ENST00000292476 LAPTM5Q13571 262 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 HIST2H2ACQ16777 129 aaPredicted RBP16.13■□□□□ 0.17
CPSF4-201ENST00000292476 PAGE2BQ5JRK9 111 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 SPANXN4Q5MJ08 99 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 RBM48Q5RL73 367 aaKnown RBP16.13■□□□□ 0.17
CPSF4-201ENST00000292476 TTC23Q5W5X9 447 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 HIST2H2AA3Q6FI13 130 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 Q6ZSR6 202 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 GPR180Q86V85 440 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 ZDHHC13Q8IUH4 622 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 MSRB3Q8IXL7 192 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 CADM4Q8NFZ8 388 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 OR5AR1Q8NGP9 310 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 SELENOMQ8WWX9 145 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 ISOC1Q96CN7 298 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 FAM122AQ96E09 287 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 CMTM7Q96FZ5 175 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 FERD3LQ96RJ6 166 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 EFCAB11Q9BUY7 163 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 THUMPD3Q9BV44 507 aaKnown RBP16.13■□□□□ 0.17
CPSF4-201ENST00000292476 KCNK6Q9Y257 313 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 TDRKHQ9Y2W6 561 aaKnown RBP16.13■□□□□ 0.17
CPSF4-201ENST00000292476 NUMA1Q14980 2115 aa16.13■□□□□ 0.17
CPSF4-201ENST00000292476 KCNE1BA0A087WTH5 132 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 A0A1W2PPC4 97 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 PDZK1P1A8MUH7 402 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 H0YIV9 168 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 CXCR6O00574 342 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 CPNE6O95741 557 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 ERGP11308 486 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 CDK4P11802 303 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 BCKDHAP12694 445 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 HSD3B1P14060 373 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 HSD3B2P26439 372 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 RPL10P27635 214 aaKnown RBP16.12■□□□□ 0.17
CPSF4-201ENST00000292476 SRP54P61011 504 aaKnown RBP16.12■□□□□ 0.17
CPSF4-201ENST00000292476 HPCAP84074 193 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 HMGCS1Q01581 520 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 E2F2Q14209 437 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 ZNF528Q3MIS6 628 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 FRG2Q64ET8 278 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 ZNF773Q6PK81 442 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 SUSD1Q6UWL2 747 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 LCTLQ6UWM7 567 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 TMEM132CQ8N3T6 1108 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 LZICQ8WZA0 190 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 UBE2E3Q969T4 207 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 METTL2AQ96IZ6 378 aaKnown RBP16.12■□□□□ 0.17
CPSF4-201ENST00000292476 ITCHQ96J02 903 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 FRG2BQ96QU4 278 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 OR52E6Q96RD3 313 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 CPPED1Q9BRF8 314 aaPredicted RBP16.12■□□□□ 0.17
CPSF4-201ENST00000292476 ACPTQ9BZG2 426 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 PAIP1Q9H074 479 aaKnown RBP16.12■□□□□ 0.17
CPSF4-201ENST00000292476 PIF1Q9H611 641 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 KAT8Q9H7Z6 458 aaKnown RBP16.12■□□□□ 0.17
CPSF4-201ENST00000292476 FARSBQ9NSD9 589 aaKnown RBP16.12■□□□□ 0.17
CPSF4-201ENST00000292476 SLC25A37Q9NYZ2 338 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 ADGRE2Q9UHX3 823 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.12■□□□□ 0.17
CPSF4-201ENST00000292476 DGKBQ9Y6T7 804 aa16.12■□□□□ 0.17
CPSF4-201ENST00000292476 TRIM64BA6NI03 449 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 PRMT3O60678 531 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 TNFP01375 233 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 HOXB9P17482 250 aaPredicted RBP16.11■□□□□ 0.17
CPSF4-201ENST00000292476 PLA2G5P39877 138 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 RPS6KA3P51812 740 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 CSTF3Q12996 717 aaKnown RBP16.11■□□□□ 0.17
CPSF4-201ENST00000292476 CYP2A13Q16696 494 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 DPY19L1Q2PZI1 675 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 TBPL2Q6SJ96 375 aa16.11■□□□□ 0.17
CPSF4-201ENST00000292476 SLC36A4Q6YBV0 504 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms