RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 CCM2Q9BSQ5 444 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 IL1RAPQ9NPH3 570 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 C14orf119Q9NWQ9 140 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 FAM120CQ9NX05 1096 aaKnown RBP15.3■□□□□ 0.04
SMAD6-201ENST00000288840 MALT1Q9UDY8 824 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 ERGIC3Q9Y282 383 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 SLC22A1O15245 554 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 SERPINI2O75830 405 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 GADD45AP24522 165 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 KRT20P35900 424 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 PPIGQ13427 754 aaKnown RBP eCLIP15.3■□□□□ 0.04
SMAD6-201ENST00000288840 FBXW2Q9UKT8 454 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 ASNA1O43681 348 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 CCNB2O95067 398 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 FUCA1P04066 466 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 PPP2R1BP30154 601 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 CLEC12AQ5QGZ9 265 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 COX20Q5RI15 118 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 ELMSAN1Q6PJG2 1045 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 COMMD6Q7Z4G1 85 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 FAM124AQ86V42 546 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 KRT78Q8N1N4 520 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 DEPDC4Q8N2C3 294 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 JPH3Q8WXH2 748 aaPredicted RBP15.29■□□□□ 0.04
SMAD6-201ENST00000288840 TADA1Q96BN2 335 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 TIFAQ96CG3 184 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 F2RL3Q96RI0 385 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 ZNF282Q9UDV7 671 aaPredicted RBP15.29■□□□□ 0.04
SMAD6-201ENST00000288840 RNF6Q9Y252 685 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 TRIM43BA6NCK2 446 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 SNX4O95219 450 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 KRT75O95678 551 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 ITGA2P17301 1181 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 DDX5P17844 614 aaKnown RBP15.29■□□□□ 0.04
SMAD6-201ENST00000288840 ISL1P61371 349 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 TUBA3CQ13748 450 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 SHQ1Q6PI26 577 aaKnown RBP15.29■□□□□ 0.04
SMAD6-201ENST00000288840 ZNF783Q6ZMS7 281 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 YAF2Q8IY57 180 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 SH3YL1Q96HL8 342 aaPredicted RBP15.29■□□□□ 0.04
SMAD6-201ENST00000288840 FAM129BQ96TA1 746 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 TUBA1CQ9BQE3 449 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 CLCA2Q9UQC9 943 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 TMED5Q9Y3A6 229 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 A8MV72 311 aaPredicted RBP15.29■□□□□ 0.04
SMAD6-201ENST00000288840 CH25HO95992 272 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 HPRP00739 348 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 MLLT10P55197 1068 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 RPS7P62081 194 aaKnown RBP15.29■□□□□ 0.04
SMAD6-201ENST00000288840 HBA1P69905 142 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 PPP2R2BQ00005 443 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 AQP6Q13520 282 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 LEXMQ3ZCV2 418 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 ZNF691Q5VV52 312 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 BRAT1Q6PJG6 821 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 MMP21Q8N119 569 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 C1GALT1C1Q96EU7 318 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 ZNF347Q96SE7 839 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 RNF167Q9H6Y7 350 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 DEC1Q9P2X7 70 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 GPSM3Q9Y4H4 160 aa15.29■□□□□ 0.04
SMAD6-201ENST00000288840 FADS2P1A8MWK0 482 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 KCNK5O95279 499 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 EIF2S1P05198 315 aaKnown RBP15.28■□□□□ 0.04
SMAD6-201ENST00000288840 PPIBP23284 216 aaKnown RBP15.28■□□□□ 0.04
SMAD6-201ENST00000288840 IDUAP35475 653 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 TM4SF4P48230 202 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 B4GALNT1Q00973 533 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 RELAQ04206 551 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 TMIGD1Q6UXZ0 262 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 TRIM46Q7Z4K8 759 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 RASGEF1AQ8N9B8 481 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 TP53INP1Q96A56 240 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 ABHD8Q96I13 439 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 ZSCAN5AQ9BUG6 496 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 VN1R3Q9BXE9 311 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 ITPAQ9BY32 194 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 CWH43Q9H720 699 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 SPHK2Q9NRA0 654 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 PPM1AP35813 382 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 EMP3P54852 163 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 C1DQ13901 141 aaKnown RBP15.28■□□□□ 0.04
SMAD6-201ENST00000288840 RGNQ15493 299 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 OR51E2Q9H255 320 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 KLHL3Q9UH77 587 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 ERVW-1Q9UQF0 538 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 ANKRD28O15084 1053 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 TLL1O43897 1013 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 FZD6O60353 706 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 NME6O75414 186 aaPredicted RBP15.28■□□□□ 0.04
SMAD6-201ENST00000288840 ETHE1O95571 254 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 RHOP08100 348 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 SLC35G4P0C7Q5 338 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 ACP5P13686 325 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 CSNK1DP48730 415 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 MASP1P48740 699 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 ZNF763Q0D2J5 394 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 PLEKHS1Q5SXH7 462 aa15.28■□□□□ 0.04
SMAD6-201ENST00000288840 GET4Q7L5D6 327 aaPredicted RBP15.28■□□□□ 0.04
SMAD6-201ENST00000288840 ZZZ3Q8IYH5 903 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms