RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 PCLAFQ15004 111 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 LNX2Q8N448 690 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 PROKR2Q8NFJ6 384 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 DAZLQ92904 295 aaKnown RBP17.9■□□□□ 0.46
PCDH1-201ENST00000287008 KCNC2Q96PR1 638 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 ASPNQ9BXN1 380 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 POLR2J2Q9GZM3 115 aaKnown RBP17.9■□□□□ 0.46
PCDH1-201ENST00000287008 B3GAT2Q9NPZ5 323 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 NPIPA5E9PKD4 350 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 AIREO43918 545 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 TACSTD2P09758 323 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 SMCO1Q147U7 214 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 C6orf136Q5SQH8 315 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 NOXRED1Q6NXP6 359 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 FBXO42Q6P3S6 717 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 PLD6Q8N2A8 252 aaKnown RBP17.9■□□□□ 0.46
PCDH1-201ENST00000287008 MEIOBQ8N635 442 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 NPWQ8N729 165 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 FGF13Q92913 245 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 PNPLA2Q96AD5 504 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 LRCH3Q96II8 777 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 NPIPA1Q9UND3 350 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 HCFC2Q9Y5Z7 792 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 TRMUO75648 421 aaKnown RBP17.89■□□□□ 0.45
PCDH1-201ENST00000287008 RABIFP47224 123 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 BCAP31P51572 246 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 MC1RQ01726 317 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 IL18Q14116 193 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 PRPF38BQ5VTL8 546 aaKnown RBP17.89■□□□□ 0.45
PCDH1-201ENST00000287008 RASSF6Q6ZTQ3 369 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 CCDC116Q8IYX3 515 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.89■□□□□ 0.45
PCDH1-201ENST00000287008 RARRES3Q9UL19 164 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 C4BP0C0L5 1744 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 ARFGEF2Q9Y6D5 1785 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 DOT1LQ8TEK3 1739 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 TCHHQ07283 1943 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 FAM170BA6NMN3 283 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 CRTC2Q53ET0 693 aaPredicted RBP17.89■□□□□ 0.45
PCDH1-201ENST00000287008 CATSPEREQ5SY80 951 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 RELL1Q8IUW5 271 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 CSNK1A1LQ8N752 337 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 C7orf57Q8NEG2 295 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 SH3YL1Q96HL8 342 aaPredicted RBP17.89■□□□□ 0.45
PCDH1-201ENST00000287008 FCRL3Q96P31 734 aaPredicted RBP17.89■□□□□ 0.45
PCDH1-201ENST00000287008 CASD1Q96PB1 797 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 PADI2Q9Y2J8 665 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 CDC123O75794 336 aaPredicted RBP17.89■□□□□ 0.45
PCDH1-201ENST00000287008 CHRM5P08912 532 aaPredicted RBP17.89■□□□□ 0.45
PCDH1-201ENST00000287008 HSD3B1P14060 373 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 HSD3B2P26439 372 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 GBX2P52951 348 aaPredicted RBP17.89■□□□□ 0.45
PCDH1-201ENST00000287008 TBPL1P62380 186 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 BICRALQ6AI39 1079 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 REEP3Q6NUK4 255 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 EPGNQ6UW88 154 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 PELOQ9BRX2 385 aaKnown RBP17.89■□□□□ 0.45
PCDH1-201ENST00000287008 WDR12Q9GZL7 423 aaKnown RBP17.89■□□□□ 0.45
PCDH1-201ENST00000287008 BRD7Q9NPI1 651 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 OARD1Q9Y530 152 aa17.89■□□□□ 0.45
PCDH1-201ENST00000287008 BPIP17213 487 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 XRCC1P18887 633 aaPredicted RBP17.88■□□□□ 0.45
PCDH1-201ENST00000287008 RTL10Q7L3V2 364 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 ZSCAN1Q8NBB4 408 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 CHMP1AQ9HD42 196 aaPredicted RBP17.88■□□□□ 0.45
PCDH1-201ENST00000287008 MARCH4Q9P2E8 410 aaPredicted RBP17.88■□□□□ 0.45
PCDH1-201ENST00000287008 FTSJ1Q9UET6 329 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 CKMT2P17540 419 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 POU6F2P78424 691 aaPredicted RBP17.88■□□□□ 0.45
PCDH1-201ENST00000287008 UFD1Q92890 307 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 TRIM63Q969Q1 353 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 MOAP1Q96BY2 351 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 NARS2Q96I59 477 aaKnown RBP17.88■□□□□ 0.45
PCDH1-201ENST00000287008 IL4I1Q96RQ9 567 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 CD180Q99467 661 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 FBRSL1Q9HCM7 1045 aaKnown RBP17.88■□□□□ 0.45
PCDH1-201ENST00000287008 OR1A2Q9Y585 309 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 NUMA1Q14980 2115 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 CRYBG1Q9Y4K1 1723 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 FAM25EA8MYX2 175 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 E7ENX8 843 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 CD1DP15813 335 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 HHEXQ03014 270 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 OLFML2AQ68BL7 652 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 RAB8BQ92930 207 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 CNDP2Q96KP4 475 aaKnown RBP17.88■□□□□ 0.45
PCDH1-201ENST00000287008 MYO7AQ13402 2215 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 RAB28P51157 221 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 ARSDP51689 593 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 TSPAN5P62079 268 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 CYP27C1Q4G0S4 372 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 MARCH8Q5T0T0 291 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 SLC36A4Q6YBV0 504 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 SYVN1Q86TM6 617 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 UBE2J2Q8N2K1 259 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 RBP7Q96R05 134 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 DKKL1Q9UK85 242 aa17.88■□□□□ 0.45
PCDH1-201ENST00000287008 RBMS1P29558 406 aaKnown RBP17.87■□□□□ 0.45
PCDH1-201ENST00000287008 RPS15P62841 145 aaKnown RBP17.87■□□□□ 0.45
PCDH1-201ENST00000287008 RNASE12Q5GAN4 147 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms