RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 OMA1Q96E52 524 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 CMTM7Q96FZ5 175 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 OR5M11Q96RB7 305 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 SLC35A5Q9BS91 424 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 IRF2BPLQ9H1B7 796 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 CFAP97Q9P2B7 532 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 SLC25A13Q9UJS0 675 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 PRKAB1Q9Y478 270 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 TRAV19A0A0A6YYK7 116 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 OR2A25A4D2G3 310 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 WISP3O95389 354 aaPredicted RBP12.91□□□□□ -0.34
SCAF4-201ENST00000286835 ANXA8P13928 327 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 ACPPP15309 386 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 GPC1P35052 558 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 GSTM5P46439 218 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 SCN1BQ07699 218 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 COL9A2Q14055 689 aaPredicted RBP12.91□□□□□ -0.34
SCAF4-201ENST00000286835 LRIT3Q3SXY7 679 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.91□□□□□ -0.34
SCAF4-201ENST00000286835 SNAP47Q5SQN1 464 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 LIPKQ5VXJ0 399 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 USP30Q70CQ3 517 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 NXPE1Q8N323 547 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 ZNF784Q8NCA9 323 aaPredicted RBP12.91□□□□□ -0.34
SCAF4-201ENST00000286835 EFHD2Q96C19 240 aaPredicted RBP12.91□□□□□ -0.34
SCAF4-201ENST00000286835 YIPF6Q96EC8 236 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 TRIB3Q96RU7 358 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 FBXO8Q9NRD0 319 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 FADS2P1A8MWK0 482 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 ANKRD28O15084 1053 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 PTTG1O95997 202 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 HOXD8P13378 290 aaPredicted RBP12.91□□□□□ -0.34
SCAF4-201ENST00000286835 ITGA2P17301 1181 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 LBX1P52954 281 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 CSNK2BP67870 215 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 MEF2AQ02078 507 aaPredicted RBP12.91□□□□□ -0.34
SCAF4-201ENST00000286835 KDM4DQ6B0I6 523 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 TRMT11Q7Z4G4 463 aaKnown RBP12.91□□□□□ -0.34
SCAF4-201ENST00000286835 BBS7Q8IWZ6 715 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 CLP1Q92989 425 aaKnown RBP12.91□□□□□ -0.34
SCAF4-201ENST00000286835 SLC29A3Q9BZD2 475 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 RLIMQ9NVW2 624 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 SIRT5Q9NXA8 310 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 NUFIP1Q9UHK0 495 aaKnown RBP12.91□□□□□ -0.34
SCAF4-201ENST00000286835 RUVBL1Q9Y265 456 aaKnown RBP12.91□□□□□ -0.34
SCAF4-201ENST00000286835 RLFQ13129 1914 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 C2orf78A6NCI8 922 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 METTL15A6NJ78 407 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 HAT1O14929 419 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 PLOD3O60568 738 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 C6orf47O95873 294 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 MYL12AP19105 171 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 RGS6P49758 472 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 LRRC66Q68CR7 880 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 CYP4Z2PQ8N1L4 340 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 B3GNT7Q8NFL0 401 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 DNAJB8Q8NHS0 232 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 SCAMP4Q969E2 229 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 NOX1Q9Y5S8 564 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 TRIM64A6NGJ6 449 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 SLITRK5O94991 958 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 KCNK2O95069 426 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 C8AP07357 584 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 GALTP07902 379 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 PSKH1P11801 424 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 SLC16A1P53985 500 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 NKX3-2P78367 333 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 ARF5P84085 180 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCAF4-201ENST00000286835 MTA1Q13330 715 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 ATP13A5Q4VNC0 1218 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 LAIR2Q6ISS4 152 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 TRIM40Q6P9F5 258 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 RFLNAQ6ZTI6 216 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 GDPD3Q7L5L3 318 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 DOHHQ9BU89 302 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 POFUT2Q9Y2G5 429 aa12.91□□□□□ -0.34
SCAF4-201ENST00000286835 IGLV3-10A0A075B6K4 115 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 FAM227AF5H4B4 570 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 PCDH7O60245 1069 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 CATP04040 527 aaKnown RBP12.9□□□□□ -0.34
SCAF4-201ENST00000286835 IFNW1P05000 195 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 ACRV1P26436 265 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 PREPP48147 710 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 UGT2B15P54855 530 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 RPS26P62854 115 aaKnown RBP12.9□□□□□ -0.34
SCAF4-201ENST00000286835 RTP2Q5QGT7 225 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 HIST2H2AA3Q6FI13 130 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 NPAS3Q8IXF0 933 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 DTX3Q8N9I9 347 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 ABCB8Q9NUT2 735 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 PCDH10Q9P2E7 1040 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 NUMA1Q14980 2115 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 FAM240BA0A1B0GVZ2 78 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 ADAMTS4O75173 837 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 STC2O76061 302 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 KCNK5O95279 499 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 ADORA3P0DMS8 318 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 SLC19A1P41440 591 aa12.9□□□□□ -0.34
SCAF4-201ENST00000286835 STK19P49842 368 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms