RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 BCAS1O75363 584 aaPredicted RBP15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 C6orf47O95873 294 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 CHRNB1P11230 501 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 ATP1B2P14415 290 aaPredicted RBP15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 SLC10A2Q12908 348 aaPredicted RBP15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 LRRC32Q14392 662 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 SIX1Q15475 284 aaPredicted RBP15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 ELOA3BQ3SY89 546 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 MS4A13Q5J8X5 152 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 SIAH1Q8IUQ4 282 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 SAMD14Q8IZD0 417 aaPredicted RBP15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 ELOA3Q8NG57 546 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 TMEM80Q96HE8 168 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 HERPUD2Q9BSE4 406 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 HPF1Q9NWY4 346 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 HCN4Q9Y3Q4 1203 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 KANTRA0A1W2PQU2 76 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 C8AP07357 584 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 ACP5P13686 325 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 EDNRAP25101 427 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 DLK2Q6UY11 383 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 TAS1R3Q7RTX0 852 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 TICAM1Q8IUC6 712 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 TAPBPLQ9BX59 468 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 TSSK6Q9BXA6 273 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 LHPPQ9H008 270 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 SEC14L4Q9UDX3 406 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 TAC3Q9UHF0 121 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 STYXL1Q9Y6J8 313 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 H3BSH0 61 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 UPK1BO75841 260 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 SLC35E2BP0CK96 405 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 GDPD4Q6W3E5 623 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 DNAJB7Q7Z6W7 309 aaPredicted RBP15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 CEP97Q8IW35 865 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 CPA6Q8N4T0 437 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 NCSTNQ92542 709 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 RGMAQ96B86 450 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 DUOX1Q9NRD9 1551 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 A0A1W2PRU2 124 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 VILLO15195 856 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 OR1I1O60431 355 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 ITGA10O75578 1167 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 PTNP21246 168 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 RPS13P62277 151 aaKnown RBP15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 HNRNPA0Q13151 305 aaKnown RBP15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 TECRLQ5HYJ1 363 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 VITQ6UXI7 678 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 FBXO15Q8NCQ5 510 aaPredicted RBP15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 OR10T2Q8NGX3 314 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 ASPNQ9BXN1 380 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 CD244Q9BZW8 370 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 FNIP2Q9P278 1114 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 A0A0G2JLL6 359 aaPredicted RBP15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 SRPRAP08240 638 aaKnown RBP15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 ZNF3P17036 446 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 CLCN7P51798 805 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 SP140Q13342 867 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 PRRT2Q7Z6L0 340 aaPredicted RBP15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 TMEM17Q86X19 198 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 RNF130Q86XS8 419 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 TIGD4Q8IY51 512 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 ZNF675Q8TD23 568 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 MCCC1Q96RQ3 725 aaPredicted RBP15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 SEZ6LQ9BYH1 1024 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 XYLT2Q9H1B5 865 aa15.93■□□□□ 0.14
SH3RF1-201ENST00000284637 RFC2P35250 354 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 AGTRAPQ6RW13 159 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 C14orf80Q86SX3 495 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 SDR16C5Q8N3Y7 309 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 OR2AP1Q8NGE2 309 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 C2orf15Q8WU43 125 aaKnown RBP15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 SUSD3Q96L08 255 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 TRIM36Q9NQ86 728 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 ZNF451Q9Y4E5 1061 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 PCDHB3Q9Y5E6 796 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 APOC3P02656 99 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 UQCRC1P31930 480 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 FKBP1BP68106 108 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 SMYD5Q6GMV2 418 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 NOXA1Q86UR1 476 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 GPALPP1Q8IXQ4 340 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 PIAS4Q8N2W9 510 aaPredicted RBP15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 KRTCAP2Q8N6L1 136 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 FAM46DQ8NEK8 389 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 SH3RF2Q8TEC5 729 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 ZNF514Q96K75 400 aaPredicted RBP15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 COQ3Q9NZJ6 369 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 UTS2RQ9UKP6 389 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 TRAV6A0A075B6T7 132 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 MAP3K8P41279 467 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 OR3A3P47888 321 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 OR3A2P47893 321 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 ZNF630Q2M218 657 aaPredicted RBP15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 SCGB2B2Q4G0G5 96 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 TXNDC8Q6A555 127 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 PAMR1Q6UXH9 720 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 Q6ZVU0 165 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 RAB8BQ92930 207 aa15.92■□□□□ 0.14
SH3RF1-201ENST00000284637 CMTM7Q96FZ5 175 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms