RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 B3GALT2O43825 422 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 DLX3O60479 287 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 GALR3O60755 368 aaPredicted RBP6.19□□□□□ -1.42
CD44-204ENST00000279452 PRAMEF4O60810 478 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 B4GALT2O60909 372 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 CNOT3O75175 753 aaKnown RBP6.19□□□□□ -1.42
CD44-204ENST00000279452 ALOX12BO75342 701 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 CLEC3AO75596 197 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 KLF7O75840 302 aaPredicted RBP6.19□□□□□ -1.42
CD44-204ENST00000279452 DNAJB5O75953 348 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 CLDN9O95484 217 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 OTCP00480 354 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 TGFB1P01137 390 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 ALBP02768 609 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 ITGB2P05107 769 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 SERPINA6P08185 405 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 RPS17P08708 135 aaKnown RBP6.19□□□□□ -1.42
CD44-204ENST00000279452 ZGLP1P0C6A0 271 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 CPA3P15088 417 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 ACPPP15309 386 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 EPORP19235 508 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 CD22P20273 847 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 JAK1P23458 1154 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 CERS1P27544 350 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 HMOX2P30519 316 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 SERPINB1P30740 379 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 HNRNPH1P31943 449 aaKnown RBP6.19□□□□□ -1.42
CD44-204ENST00000279452 CRHR1P34998 444 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 SSR2P43308 183 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 GCGRP47871 477 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 CCL11P51671 97 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 EMP2P54851 167 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 RRADP55042 308 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 POLE2P56282 527 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 HERVK_113P63132 956 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 SNRPNP63162 240 aaKnown RBP6.19□□□□□ -1.42
CD44-204ENST00000279452 EEF1A2Q05639 463 aaKnown RBP6.19□□□□□ -1.42
CD44-204ENST00000279452 ZNF844Q08AG5 666 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 RAPSNQ13702 412 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 LY6DQ14210 128 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 SSPNQ14714 243 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 RASA2Q15283 850 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 ZRSR2Q15696 482 aaKnown RBP6.19□□□□□ -1.42
CD44-204ENST00000279452 TBCCQ15814 346 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 CCDC153Q494R4 210 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 IRAK1BP1Q5VVH5 260 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 PRAMEF9Q5VWM5 478 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 LIPJQ5W064 366 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 CPZQ66K79 652 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 NIPAL1Q6NVV3 410 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 MRPL14Q6P1L8 145 aaKnown RBP6.19□□□□□ -1.42
CD44-204ENST00000279452 ZYG11AQ6WRX3 759 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 CHSY3Q70JA7 882 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 MILR1Q7Z6M3 343 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 MRGPREQ86SM8 312 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 TRABD2AQ86V40 505 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 PDSS2Q86YH6 399 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 TMEM151BQ8IW70 566 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 ZC3H7AQ8IWR0 971 aaKnown RBP6.19□□□□□ -1.42
CD44-204ENST00000279452 RNF175Q8N4F7 328 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 AMER3Q8N944 861 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 CLEC1AQ8NC01 280 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 ARMC2Q8NEN0 867 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 OR4F6Q8NGB9 312 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 OR52B6Q8NGF0 335 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 OR5T3Q8NGG3 340 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 UTP15Q8TED0 518 aaKnown RBP6.19□□□□□ -1.42
CD44-204ENST00000279452 SREK1Q8WXA9 508 aaKnown RBP6.19□□□□□ -1.42
CD44-204ENST00000279452 TM4SF19Q96DZ7 209 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 CCDC126Q96EE4 140 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 VPS50Q96JG6 964 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 MAGEB10Q96LZ2 347 aaPredicted RBP6.19□□□□□ -1.42
CD44-204ENST00000279452 FER1L6-AS2Q96M78 137 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 FAM111AQ96PZ2 611 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 TMEM237Q96Q45 408 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 F2RL3Q96RI0 385 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 MTERF1Q99551 399 aaKnown RBP6.19□□□□□ -1.42
CD44-204ENST00000279452 SPSB2Q99619 263 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 ERVK-6Q9BXR3 956 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 FAM117AQ9C073 453 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 SLC6A16Q9GZN6 736 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 PITHD1Q9GZP4 211 aaPredicted RBP6.19□□□□□ -1.42
CD44-204ENST00000279452 KLHL31Q9H511 634 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 ELOVL6Q9H5J4 265 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 NT5DC2Q9H857 520 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 RRAGDQ9NQL2 400 aaPredicted RBP6.19□□□□□ -1.42
CD44-204ENST00000279452 SEMA3GQ9NS98 782 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 ARGLU1Q9NWB6 273 aaPredicted RBP6.19□□□□□ -1.42
CD44-204ENST00000279452 LGALS13Q9UHV8 139 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 MKL2Q9ULH7 1088 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 RNF11Q9Y3C5 154 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 PCDHGA11Q9Y5H2 935 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 SLC22A7Q9Y694 548 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 CCDC151A5D8V7 595 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 LRIT2A6NDA9 550 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 IDSB3KWA1 339 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 C4orf51C9J302 202 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 MKRN2OSH3BPM6 223 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 MASP2O00187 686 aa6.18□□□□□ -1.42
CD44-204ENST00000279452 RTCAO00442 366 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms