RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 SFT2D3Q587I9 215 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 DPY19L3Q6ZPD9 716 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 DCUN1D3Q8IWE4 304 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 GPALPP1Q8IXQ4 340 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 ZNF548Q8NEK5 533 aaPredicted RBP11.09□□□□□ -0.63
USP53-201ENST00000274030 HRASLS2Q9NWW9 162 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 CFL2Q9Y281 166 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 TMED5Q9Y3A6 229 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 AFDNP55196 1824 aaKnown RBP11.09□□□□□ -0.63
USP53-201ENST00000274030 DLDP09622 509 aaKnown RBP11.09□□□□□ -0.63
USP53-201ENST00000274030 RHDQ02161 417 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 RIN1Q13671 783 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 OR6N1Q8NGY5 312 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 IGSF21Q96ID5 467 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 MGAT4AQ9UM21 535 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 SLC22A1O15245 554 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 SCGB1D2O95969 90 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 MRPL3P09001 348 aaKnown RBP11.08□□□□□ -0.64
USP53-201ENST00000274030 GSTM3P21266 225 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 CASRP41180 1078 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 PIK3CBP42338 1070 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 EMX2Q04743 252 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 ABHD18Q0P651 414 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 GON4LQ3T8J9 2241 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 TTLL10Q6ZVT0 673 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 THAP3Q8WTV1 239 aaPredicted RBP11.08□□□□□ -0.64
USP53-201ENST00000274030 CRELD1Q96HD1 420 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 ITPAQ9BY32 194 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 FNIP2Q9P278 1114 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 A0A1W2PP55 124 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 C2orf78A6NCI8 922 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 AGR2O95994 175 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 C8BP07358 591 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 ITGA5P08648 1049 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 PRKCDQ05655 676 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 TBC1D25Q3MII6 688 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 EOGTQ5NDL2 527 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 TMED4Q7Z7H5 227 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 ADGRD2Q7Z7M1 963 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 TOMM5Q8N4H5 51 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 SUN3Q8TAQ9 357 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 SGCDQ92629 289 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 GAL3ST3Q96A11 431 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 XYLT2Q9H1B5 865 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 IRF2BPLQ9H1B7 796 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 SLC6A15Q9H2J7 730 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 SOX1O00570 391 aaPredicted RBP11.08□□□□□ -0.64
USP53-201ENST00000274030 CHP2O43745 196 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 COQ9O75208 318 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 KLK3P07288 261 aaPredicted RBP11.08□□□□□ -0.64
USP53-201ENST00000274030 FPR1P21462 350 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 VAMP1P23763 118 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 VSX2P58304 361 aaPredicted RBP11.08□□□□□ -0.64
USP53-201ENST00000274030 LMAN2Q12907 356 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 GRB7Q14451 532 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 RAB6CQ53S08 254 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 ZNF542PQ5EBM4 170 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 TPRG1LQ5T0D9 272 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 AMIGO1Q86WK6 493 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 PNLDC1Q8NA58 520 aaKnown RBP11.08□□□□□ -0.64
USP53-201ENST00000274030 MMABQ96EY8 250 aaPredicted RBP11.08□□□□□ -0.64
USP53-201ENST00000274030 IL17FQ96PD4 163 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 RAB6CQ9H0N0 254 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 RPF2Q9H7B2 306 aaKnown RBP11.08□□□□□ -0.64
USP53-201ENST00000274030 FAM120CQ9NX05 1096 aaKnown RBP11.08□□□□□ -0.64
USP53-201ENST00000274030 ZNF69Q9UC07 566 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 KDM4BO94953 1096 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 CSTBP04080 98 aaKnown RBP11.08□□□□□ -0.64
USP53-201ENST00000274030 FGF3P11487 239 aaPredicted RBP11.08□□□□□ -0.64
USP53-201ENST00000274030 SLC9A3P48764 834 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 EZH1Q92800 747 aaPredicted RBP11.08□□□□□ -0.64
USP53-201ENST00000274030 KCNJ9Q92806 393 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 BAIAP2Q9UQB8 552 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 MAU2Q9Y6X3 613 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 KLF11O14901 512 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 RFPL1O75677 317 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 RHOP08100 348 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 SRPRAP08240 638 aaKnown RBP11.08□□□□□ -0.64
USP53-201ENST00000274030 CSF2RAP15509 400 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 RPP38P78345 283 aaKnown RBP11.08□□□□□ -0.64
USP53-201ENST00000274030 ANKDD1AQ495B1 522 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 ZBED5Q49AG3 693 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 C6orf136Q5SQH8 315 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 XKR5Q6UX68 686 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 GPAT4Q86UL3 456 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 WACQ9BTA9 647 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 OR51I1Q9H343 314 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 METTL8Q9H825 291 aaKnown RBP11.08□□□□□ -0.64
USP53-201ENST00000274030 CYTH4Q9UIA0 394 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 PLEKHA6Q9Y2H5 1048 aa11.08□□□□□ -0.64
USP53-201ENST00000274030 OR2AT4A6NND4 320 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 C11orf98E9PRG8 122 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 K7ERQ8 282 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 TSPAN4O14817 238 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 ZNF763Q0D2J5 394 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 SLC10A2Q12908 348 aaPredicted RBP11.07□□□□□ -0.64
USP53-201ENST00000274030 SPIN3Q5JUX0 258 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 ERMP1Q7Z2K6 904 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 TMCO2Q7Z6W1 182 aaPredicted RBP11.07□□□□□ -0.64
USP53-201ENST00000274030 SLITRK4Q8IW52 837 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms