RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 LYSMD2Q8IV50 215 aa8.78□□□□□ -1
MSH4-201ENST00000263187 CELF5Q8N6W0 485 aaKnown RBP8.78□□□□□ -1
MSH4-201ENST00000263187 RHOXF1Q8NHV9 184 aa8.78□□□□□ -1
MSH4-201ENST00000263187 WDR48Q8TAF3 677 aa8.78□□□□□ -1
MSH4-201ENST00000263187 CSGALNACT1Q8TDX6 532 aa8.78□□□□□ -1
MSH4-201ENST00000263187 SLC38A4Q969I6 547 aa8.78□□□□□ -1
MSH4-201ENST00000263187 NEIL2Q969S2 332 aa8.78□□□□□ -1
MSH4-201ENST00000263187 VMP1Q96GC9 406 aa8.78□□□□□ -1
MSH4-201ENST00000263187 CORO1BQ9BR76 489 aa8.78□□□□□ -1
MSH4-201ENST00000263187 LINC00597Q9H2U6 94 aa8.78□□□□□ -1
MSH4-201ENST00000263187 GPATCH2Q9NW75 528 aa8.78□□□□□ -1
MSH4-201ENST00000263187 TMEM45AQ9NWC5 275 aa8.78□□□□□ -1
MSH4-201ENST00000263187 HCFC1R1Q9NWW0 138 aa8.78□□□□□ -1
MSH4-201ENST00000263187 LYVE1Q9Y5Y7 322 aa8.78□□□□□ -1
MSH4-201ENST00000263187 GPC6Q9Y625 555 aaPredicted RBP8.78□□□□□ -1
MSH4-201ENST00000263187 DSCR3O14972 297 aa8.78□□□□□ -1
MSH4-201ENST00000263187 KCNK2O95069 426 aa8.78□□□□□ -1
MSH4-201ENST00000263187 GPX2P18283 190 aa8.78□□□□□ -1
MSH4-201ENST00000263187 HNF4AP41235 474 aa8.78□□□□□ -1
MSH4-201ENST00000263187 RAE1P78406 368 aaKnown RBP8.78□□□□□ -1
MSH4-201ENST00000263187 SRSF11Q05519 484 aaKnown RBP8.78□□□□□ -1
MSH4-201ENST00000263187 IL18R1Q13478 541 aa8.78□□□□□ -1
MSH4-201ENST00000263187 TSTQ16762 297 aaKnown RBP8.78□□□□□ -1
MSH4-201ENST00000263187 ZC3H12BQ5HYM0 836 aaKnown RBP8.78□□□□□ -1
MSH4-201ENST00000263187 ARMC8Q8IUR7 673 aa8.78□□□□□ -1
MSH4-201ENST00000263187 OR7G3Q8NG95 312 aa8.78□□□□□ -1
MSH4-201ENST00000263187 IL17FQ96PD4 163 aa8.78□□□□□ -1
MSH4-201ENST00000263187 SLC35A5Q9BS91 424 aa8.78□□□□□ -1
MSH4-201ENST00000263187 MRPL17Q9NRX2 175 aaKnown RBP8.78□□□□□ -1
MSH4-201ENST00000263187 LSM7Q9UK45 103 aaKnown RBP8.78□□□□□ -1
MSH4-201ENST00000263187 A0A0G2JN53 185 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 FADS2P1A8MWK0 482 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 TMEM229AB2RXF0 380 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 RTCAO00442 366 aaKnown RBP8.77□□□□□ -1.01
MSH4-201ENST00000263187 SCAMP2O15127 329 aaKnown RBP8.77□□□□□ -1.01
MSH4-201ENST00000263187 LRRTM2O43300 516 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 EIF2DP41214 584 aaKnown RBP8.77□□□□□ -1.01
MSH4-201ENST00000263187 SOX3P41225 446 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 ALDH9A1P49189 494 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 PCYT1AP49585 367 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 METAP1P53582 386 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 ITGA1P56199 1179 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 ARSIQ5FYB1 569 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 ATAD3BQ5T9A4 648 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 TNFAIP8L2Q6P589 184 aaPredicted RBP8.77□□□□□ -1.01
MSH4-201ENST00000263187 C22orf39Q6P5X5 142 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 NPAS3Q8IXF0 933 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 OR8H2Q8N162 312 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 TCAIMQ8N3R3 496 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 PARP16Q8N5Y8 322 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 B3GNT7Q8NFL0 401 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 C2orf15Q8WU43 125 aaKnown RBP8.77□□□□□ -1.01
MSH4-201ENST00000263187 FBLIM1Q8WUP2 373 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 ZNF566Q969W8 418 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 CNPPD1Q9BV87 410 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 FAM83DQ9H4H8 585 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 OSGIN1Q9UJX0 560 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 INSL5Q9Y5Q6 135 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 CFAP20Q9Y6A4 193 aaKnown RBP8.77□□□□□ -1.01
MSH4-201ENST00000263187 FRMPD3Q5JV73 1810 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 CKAP5Q14008 2032 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 PRAMEF33A0A0G2JMD5 474 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 AP3D1O14617 1153 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 PRAMEF10O60809 474 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 URODP06132 367 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 KLK1P06870 262 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 C8GP07360 202 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 PABPC1P11940 636 aaKnown RBP8.77□□□□□ -1.01
MSH4-201ENST00000263187 TCEA1P23193 301 aaKnown RBP8.77□□□□□ -1.01
MSH4-201ENST00000263187 ACVR2AP27037 513 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 TRPC1P48995 793 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 PPP5CP53041 499 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 C2orf80Q0P641 193 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 TAB1Q15750 504 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 PRSS53Q2L4Q9 553 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 DEPDC1Q5TB30 811 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 WDR53Q7Z5U6 358 aaPredicted RBP8.77□□□□□ -1.01
MSH4-201ENST00000263187 GATAD2AQ86YP4 633 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 CYP4Z2PQ8N1L4 340 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 SYNPOQ8N3V7 929 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 L3MBTL4Q8NA19 623 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 RAB8BQ92930 207 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 TMEM203Q969S6 136 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 TMEM159Q96B96 161 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 CEP295NLQ96MC4 621 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 DOHHQ9BU89 302 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 SPNS1Q9H2V7 528 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 ZNF226Q9NYT6 803 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 STOX2Q9P2F5 926 aaPredicted RBP8.77□□□□□ -1.01
MSH4-201ENST00000263187 PCDHGB3Q9Y5G1 929 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 KNL1Q8NG31 2342 aa8.77□□□□□ -1.01
MSH4-201ENST00000263187 TFECO14948 347 aaPredicted RBP8.76□□□□□ -1.01
MSH4-201ENST00000263187 LEFTY1O75610 366 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 UPK1BO75841 260 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 INHAP05111 366 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 ADORA3P0DMS8 318 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 PTNP21246 168 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 IDSP22304 550 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 S100A5P33763 92 aa8.76□□□□□ -1.01
MSH4-201ENST00000263187 TAS2R50P59544 299 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms