RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 CSKP41240 450 aa12.47□□□□□ -0.41
TTC39A-202ENST00000262676 ACSBG2Q5FVE4 666 aa12.47□□□□□ -0.41
TTC39A-202ENST00000262676 CRTC1Q6UUV9 634 aa12.47□□□□□ -0.41
TTC39A-202ENST00000262676 NAPRTQ6XQN6 538 aa12.47□□□□□ -0.41
TTC39A-202ENST00000262676 SLC30A8Q8IWU4 369 aa12.47□□□□□ -0.41
TTC39A-202ENST00000262676 AQP11Q8NBQ7 271 aa12.47□□□□□ -0.41
TTC39A-202ENST00000262676 OR6Q1Q8NGQ2 317 aa12.47□□□□□ -0.41
TTC39A-202ENST00000262676 C15orf40Q8WUR7 153 aa12.47□□□□□ -0.41
TTC39A-202ENST00000262676 GPR88Q9GZN0 384 aa12.47□□□□□ -0.41
TTC39A-202ENST00000262676 CARS2Q9HA77 564 aaKnown RBP12.47□□□□□ -0.41
TTC39A-202ENST00000262676 IFNA5P01569 189 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 ANXA3P12429 323 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 GTF2F2P13984 249 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 GLDCP23378 1020 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 RBMXP38159 391 aaKnown RBP12.46□□□□□ -0.41
TTC39A-202ENST00000262676 SMSP52788 366 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 NFKB2Q00653 900 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.46□□□□□ -0.41
TTC39A-202ENST00000262676 TAS1R3Q7RTX0 852 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 OR10Q1Q8NGQ4 319 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 ORAI3Q9BRQ5 295 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 NELFAQ9H3P2 528 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 VILLO15195 856 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 PET100P0DJ07 73 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 ERP29P30040 261 aaKnown RBP12.46□□□□□ -0.41
TTC39A-202ENST00000262676 SCNN1AP37088 669 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 ACTR1BP42025 376 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 DSTNP60981 165 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 ACTR1AP61163 376 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 ST3GAL4Q11206 333 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 GNMTQ14749 295 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 NFKBIDQ8NI38 313 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 EBF4Q9BQW3 602 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 TPSD1Q9BZJ3 242 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 H7C417 338 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 KLF8O95600 359 aaPredicted RBP12.46□□□□□ -0.41
TTC39A-202ENST00000262676 LCKP06239 509 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 ZNF8P17098 575 aaPredicted RBP12.46□□□□□ -0.41
TTC39A-202ENST00000262676 SELENOVP59797 346 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 CREB3L1Q96BA8 519 aa12.46□□□□□ -0.41
TTC39A-202ENST00000262676 RUVBL1Q9Y265 456 aaKnown RBP12.46□□□□□ -0.41
TTC39A-202ENST00000262676 HEMK1Q9Y5R4 338 aaPredicted RBP12.46□□□□□ -0.41
TTC39A-202ENST00000262676 HSBP1L1C9JCN9 74 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 NPHS1O60500 1241 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 AP2A1O95782 977 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 IQCF3P0C7M6 154 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 ZNF616Q08AN1 781 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 NIPAL4Q0D2K0 466 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 TGFBIQ15582 683 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 MEP1AQ16819 746 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 ZNF527Q8NB42 609 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 DNAJB4Q9UDY4 337 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 A0A0U1RQK1 487 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 WNT7AO00755 349 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 DIRAS1O95057 198 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 MT-CYBP00156 380 aaPredicted RBP12.46□□□□□ -0.42
TTC39A-202ENST00000262676 TGFB1P01137 390 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 MPIP34949 423 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 GRIA1P42261 906 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 RAB15P59190 212 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 CHRFAM7AQ494W8 412 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 TMEM80Q96HE8 168 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.46□□□□□ -0.42
TTC39A-202ENST00000262676 OR51I1Q9H343 314 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 FKBPLQ9UIM3 349 aa12.46□□□□□ -0.42
TTC39A-202ENST00000262676 FAM237AA0A1B0GTK4 181 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 FAM170BA6NMN3 283 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 TLX2O43763 284 aaPredicted RBP12.45□□□□□ -0.42
TTC39A-202ENST00000262676 RFPL2O75678 378 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 JUNP05412 331 aaKnown RBP12.45□□□□□ -0.42
TTC39A-202ENST00000262676 C8BP07358 591 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 XKR5Q6UX68 686 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 SLC25A44Q96H78 314 aaPredicted RBP12.45□□□□□ -0.42
TTC39A-202ENST00000262676 FAM83DQ9H4H8 585 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 TDP1Q9NUW8 608 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 ZNF701Q9NV72 531 aaPredicted RBP12.45□□□□□ -0.42
TTC39A-202ENST00000262676 P2RX2Q9UBL9 471 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 FBP2O00757 339 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 PDYNP01213 254 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 MRPL3P09001 348 aaKnown RBP12.45□□□□□ -0.42
TTC39A-202ENST00000262676 PXNP49023 591 aaPredicted RBP12.45□□□□□ -0.42
TTC39A-202ENST00000262676 ENTPD1P49961 510 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 AIF1P55008 147 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 PHOX2BQ99453 314 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 GATA5Q9BWX5 397 aaPredicted RBP12.45□□□□□ -0.42
TTC39A-202ENST00000262676 GLS2Q9UI32 602 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 RNF6Q9Y252 685 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 C2orf74A8MZ97 194 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 LRRN3E7EW58 273 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 BLOC1S5-TXNDC5H3BN57 136 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 TRAPPC6AO75865 159 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 C8GP07360 202 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 CD48P09326 243 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 CFL1P23528 166 aaKnown RBP12.45□□□□□ -0.42
TTC39A-202ENST00000262676 KANK2Q63ZY3 851 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 SLC39A4Q6P5W5 647 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 OR52E4Q8NGH9 312 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 ZNF641Q96N77 438 aaPredicted RBP12.45□□□□□ -0.42
TTC39A-202ENST00000262676 DGAT2Q96PD7 388 aa12.45□□□□□ -0.42
TTC39A-202ENST00000262676 LRRN3Q9H3W5 708 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms