RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 SLC25A25Q6KCM7 469 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 GALNTL5Q7Z4T8 443 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 RPS19BP1Q86WX3 136 aaKnown RBP11.52□□□□□ -0.57
TRAF4-202ENST00000262396 KLHL7Q8IXQ5 586 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 ARHGEF39Q8N4T4 335 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 ZNF740Q8NDX6 193 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 PLPP5Q8NEB5 264 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 TM4SF19Q96DZ7 209 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 CCDC77Q9BR77 488 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 DEFB126Q9BYW3 111 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 DDX47Q9H0S4 455 aaKnown RBP11.52□□□□□ -0.57
TRAF4-202ENST00000262396 TXNDC16Q9P2K2 825 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 ZFP69BQ9UJL9 534 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 SH2B3Q9UQQ2 575 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 KLF2Q9Y5W3 355 aaPredicted RBP11.52□□□□□ -0.57
TRAF4-202ENST00000262396 KCNE2Q9Y6J6 123 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 CACNA1DQ01668 2161 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 A0A088AWK7 358 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 GALR3O60755 368 aaPredicted RBP11.51□□□□□ -0.57
TRAF4-202ENST00000262396 SP1P08047 785 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 RNH1P13489 461 aaKnown RBP11.51□□□□□ -0.57
TRAF4-202ENST00000262396 ZNF24P17028 368 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 ZNF10P21506 573 aaPredicted RBP11.51□□□□□ -0.57
TRAF4-202ENST00000262396 ELK3P41970 407 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 CYB561P49447 251 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 STXBP1P61764 594 aaKnown RBP11.51□□□□□ -0.57
TRAF4-202ENST00000262396 RHAGQ02094 409 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 TOR1AIP1Q5JTV8 583 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 XKRXQ6PP77 449 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 BNC2Q6ZN30 1099 aaPredicted RBP11.51□□□□□ -0.57
TRAF4-202ENST00000262396 GDF7Q7Z4P5 450 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.51□□□□□ -0.57
TRAF4-202ENST00000262396 THOC6Q86W42 341 aaKnown RBP11.51□□□□□ -0.57
TRAF4-202ENST00000262396 PDSS2Q86YH6 399 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 TICAM1Q8IUC6 712 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 GHDCQ8N2G8 530 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 AGGF1Q8N302 714 aaeCLIP11.51□□□□□ -0.57
TRAF4-202ENST00000262396 NKAPQ8N5F7 415 aaKnown RBP11.51□□□□□ -0.57
TRAF4-202ENST00000262396 ABHD11Q8NFV4 315 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 OR56A3Q8NH54 315 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 FBXL8Q96CD0 374 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 CAPZA3Q96KX2 299 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 RUNDC3BQ96NL0 473 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 SIGLEC12Q96PQ1 595 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 HES7Q9BYE0 225 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 TRMT1Q9NXH9 659 aaKnown RBP11.51□□□□□ -0.57
TRAF4-202ENST00000262396 TINAGQ9UJW2 476 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 FBXW2Q9UKT8 454 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 SNX12Q9UMY4 172 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 NEU2Q9Y3R4 380 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 PCDHGB6Q9Y5F9 930 aa11.51□□□□□ -0.57
TRAF4-202ENST00000262396 DIDO1Q9BTC0 2240 aaKnown RBP11.51□□□□□ -0.57
TRAF4-202ENST00000262396 MYO9AB2RTY4 2548 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 POLEQ07864 2286 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 PRRG2O14669 202 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 TFECO14948 347 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-202ENST00000262396 CLGNO14967 610 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 SLC25A12O75746 678 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 TSPAN12O95859 305 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 TCP1P17987 556 aaKnown RBP11.5□□□□□ -0.57
TRAF4-202ENST00000262396 HPDP32754 393 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-202ENST00000262396 AHRP35869 848 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 PAFAH1B1P43034 410 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 EFNA3P52797 238 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 BTN3A2P78410 334 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 DR1Q01658 176 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 MORF4L2Q15014 288 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 C3AR1Q16581 482 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 ZXDCQ2QGD7 858 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-202ENST00000262396 TEDDM1Q5T9Z0 273 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 H3F3CQ6NXT2 135 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 SYDE1Q6ZW31 735 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-202ENST00000262396 STRA8Q7Z7C7 330 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 SPPL2CQ8IUH8 684 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 ANKMY2Q8IV38 441 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 TMEM156Q8N614 296 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 AMER2Q8N7J2 671 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 NT5CQ8TCD5 201 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 ITLN2Q8WWU7 325 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-202ENST00000262396 NEIL2Q969S2 332 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 GPR137Q96N19 417 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 TRIM31Q9BZY9 425 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 COPS7BQ9H9Q2 264 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-202ENST00000262396 PELI2Q9HAT8 420 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 PRDM9Q9NQV7 894 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 PNO1Q9NRX1 252 aaKnown RBP11.5□□□□□ -0.57
TRAF4-202ENST00000262396 SLC17A6Q9P2U8 582 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 CTNNAL1Q9UBT7 734 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 SLC22A14Q9Y267 594 aa11.5□□□□□ -0.57
TRAF4-202ENST00000262396 MRPS33Q9Y291 106 aaKnown RBP11.5□□□□□ -0.57
TRAF4-202ENST00000262396 NPEPPSL1A6NEC2 478 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 KLRC4-KLRK1H3BQV0 150 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 CES2O00748 559 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 CLDN4O14493 209 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 ASNA1O43681 348 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 CDC40O60508 579 aaKnown RBP eCLIP11.49□□□□□ -0.579e-6■■■□□ 15.9
TRAF4-202ENST00000262396 WDR47O94967 919 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 B3GALT4O96024 378 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 S100BP04271 92 aaPredicted RBP11.49□□□□□ -0.57
TRAF4-202ENST00000262396 MAOAP21397 527 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms