RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 ZNF33BQ06732 778 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 C10orf62Q5T681 223 aaPredicted RBP11.03□□□□□ -0.64
PFDN1-201ENST00000261813 NXPE4Q6UWF7 544 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 SLCO4C1Q6ZQN7 724 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 GPRIN3Q6ZVF9 776 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 TIPARPQ7Z3E1 657 aaKnown RBP11.03□□□□□ -0.64
PFDN1-201ENST00000261813 SPATA21Q7Z572 469 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 GOLGA7Q7Z5G4 137 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 MILR1Q7Z6M3 343 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 PIGWQ7Z7B1 504 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 DTX1Q86Y01 620 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 TMEM126BQ8IUX1 230 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 SNX31Q8N9S9 440 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 SLC38A9Q8NBW4 561 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 ZNF740Q8NDX6 193 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 SORT1Q99523 831 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 ULBP3Q9BZM4 244 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 FAM107BQ9H098 131 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 NOL11Q9H8H0 719 aaKnown RBP11.03□□□□□ -0.64
PFDN1-201ENST00000261813 PELI2Q9HAT8 420 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 MID1IP1Q9NPA3 183 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 SEMA4BQ9NPR2 832 aaPredicted RBP11.03□□□□□ -0.64
PFDN1-201ENST00000261813 ENAMQ9NRM1 1142 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 STARD5Q9NSY2 213 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 SERTAD3Q9UJW9 196 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 TRAF6Q9Y4K3 522 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 STMND1H3BQB6 276 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 AZIN1O14977 448 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 HDAC3O15379 428 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 ZSCAN9O15535 394 aaPredicted RBP11.03□□□□□ -0.64
PFDN1-201ENST00000261813 ZNF749O43361 778 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 SNX3O60493 162 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 RAD1O60671 282 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 SRPX2O60687 465 aaPredicted RBP11.03□□□□□ -0.64
PFDN1-201ENST00000261813 CPNE3O75131 537 aaKnown RBP11.03□□□□□ -0.64
PFDN1-201ENST00000261813 CLDN9O95484 217 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 C1GALT1C1LP0DN25 315 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 UROSP10746 265 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 LIPCP11150 499 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 ARL1P40616 181 aaPredicted RBP11.03□□□□□ -0.64
PFDN1-201ENST00000261813 HNF4AP41235 474 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 SCTRP47872 440 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 RPS15AP62244 130 aaKnown RBP11.03□□□□□ -0.64
PFDN1-201ENST00000261813 REEP5Q00765 189 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 CLN3Q13286 438 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 LAPTM5Q13571 262 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 TERF2Q15554 542 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 TGIF1Q15583 401 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 TBCCQ15814 346 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 GGTA1PQ4G0N0 100 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 PAGE2BQ5JRK9 111 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 SH2D4BQ5SQS7 431 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 WASHC2DQ5SRD0 308 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 LIPJQ5W064 366 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 ATG9BQ674R7 924 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 VN1R4Q7Z5H5 301 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 GPR135Q8IZ08 494 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 ZNF655Q8N720 491 aaPredicted RBP11.03□□□□□ -0.64
PFDN1-201ENST00000261813 GALNT6Q8NCL4 622 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 AGAP11Q8TF27 550 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 CCT6BQ92526 530 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 NAF1Q96HR8 494 aaKnown RBP11.03□□□□□ -0.64
PFDN1-201ENST00000261813 ELAC2Q9BQ52 826 aaKnown RBP11.03□□□□□ -0.64
PFDN1-201ENST00000261813 SARGQ9BW04 601 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 C20orf27Q9GZN8 174 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 EHD1Q9H4M9 534 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 ACTR8Q9H981 624 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 ACTR5Q9H9F9 607 aaPredicted RBP11.03□□□□□ -0.64
PFDN1-201ENST00000261813 MRGBPQ9NV56 204 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 IRAK4Q9NWZ3 460 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 TRPS1Q9UHF7 1281 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 RAXQ9Y2V3 346 aa11.03□□□□□ -0.64
PFDN1-201ENST00000261813 PCM1Q15154 2024 aa11.02□□□□□ -0.64
PFDN1-201ENST00000261813 SDK2Q58EX2 2172 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 KCNE1BA0A087WTH5 132 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 TRBC2A0A5B9 178 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 FITM1A5D6W6 292 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 P2RX6O15547 441 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 VPS4BO75351 444 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 LYPLA1O75608 230 aaPredicted RBP11.02□□□□□ -0.65
PFDN1-201ENST00000261813 WFS1O76024 890 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 MED26O95402 600 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 STATHP02808 62 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 EIF2S1P05198 315 aaKnown RBP11.02□□□□□ -0.65
PFDN1-201ENST00000261813 CHRNGP07510 517 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 CD22P20273 847 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 CXCR2P25025 360 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 RORAP35398 523 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 GRK3P35626 688 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 EIF2S3P41091 472 aaKnown RBP11.02□□□□□ -0.65
PFDN1-201ENST00000261813 CASP2P42575 452 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 IRF8Q02556 426 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 E2F2Q14209 437 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 MAP7Q14244 749 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 HIST2H2ACQ16777 129 aaPredicted RBP11.02□□□□□ -0.65
PFDN1-201ENST00000261813 HKDC1Q2TB90 917 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 PRTGQ2VWP7 1150 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 TCTE1Q5JU00 501 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 LCE2CQ5TA81 110 aa11.02□□□□□ -0.65
PFDN1-201ENST00000261813 HIST2H2AA3Q6FI13 130 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms