RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 TPK1Q9H3S4 243 aa13.94□□□□□ -0.18
SFSWAP-201ENST00000261674 RDH14Q9HBH5 336 aa13.94□□□□□ -0.18
SFSWAP-201ENST00000261674 FBXO8Q9NRD0 319 aa13.94□□□□□ -0.18
SFSWAP-201ENST00000261674 OR51B4Q9Y5P0 310 aa13.94□□□□□ -0.18
SFSWAP-201ENST00000261674 ETHE1O95571 254 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 CD22P20273 847 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 WNT3P56703 355 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 CCDC92Q53HC0 331 aaPredicted RBP13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 COX20Q5RI15 118 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 LYPLAL1Q5VWZ2 237 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 USP45Q70EL2 814 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 OR8H2Q8N162 312 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 C2orf73Q8N5S3 287 aaPredicted RBP13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 DNAJB8Q8NHS0 232 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 ZNF675Q8TD23 568 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 PHF10Q8WUB8 498 aaKnown RBP13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 APH1BQ8WW43 257 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 ASB11Q8WXH4 323 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 CEP19Q96LK0 163 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 IL4I1Q96RQ9 567 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 NIPSNAP1Q9BPW8 284 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 SLC12A9Q9BXP2 914 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 B4GALT6Q9UBX8 382 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 RAB23Q9ULC3 237 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 M0R082 166 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 COQ9O75208 318 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 SPNP16150 400 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 GPX2P18283 190 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 GRK3P35626 688 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 TGFBR2P37173 567 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 CXCR4P61073 352 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 MC1RQ01726 317 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 GPM6BQ13491 265 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 SMU1Q2TAY7 513 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 PPP2R2DQ66LE6 453 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 TPRG1Q6ZUI0 275 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 Q6ZVL8 140 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 LRRC70Q7Z2Q7 622 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 LYSMD2Q8IV50 215 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 LGI4Q8N135 537 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 GGHQ92820 318 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 TRIM39Q9HCM9 518 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 PCDHB11Q9Y5F2 797 aa13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 COL4A4P53420 1690 aaPredicted RBP13.93□□□□□ -0.18
SFSWAP-201ENST00000261674 PTHP01270 115 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 MEF2AQ02078 507 aaPredicted RBP13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 GAB1Q13480 694 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 SYTL3Q4VX76 610 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 DPY19L3Q6ZPD9 716 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 Q6ZVU0 165 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 GRASPQ7Z6J2 395 aaPredicted RBP13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 THOC6Q86W42 341 aaKnown RBP13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 ITPKCQ96DU7 683 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 ALG14Q96F25 216 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 SUV39H2Q9H5I1 410 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 ZNF556Q9HAH1 456 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 SLC28A3Q9HAS3 691 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 TRBV5-4A0A0C4DH59 114 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 UPK1BO75841 260 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 ATP1B2P14415 290 aaPredicted RBP13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 EIF2DP41214 584 aaKnown RBP13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 CCR2P41597 374 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 EPHB3P54753 998 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 SF3B4Q15427 424 aaKnown RBP eCLIP13.92□□□□□ -0.183e-7■■■■■ 28.4
SFSWAP-201ENST00000261674 ATAD3BQ5T9A4 648 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 DESI1Q6ICB0 168 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 ERICH5Q6P6B1 374 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 AKAP14Q86UN6 197 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 CHST14Q8NCH0 376 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 C11orf65Q8NCR3 313 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 UBTD2Q8WUN7 234 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 IPCEF1Q8WWN9 437 aaPredicted RBP13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 MYDGFQ969H8 173 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 NUAK2Q9H093 628 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 ZBP1Q9H171 429 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 ERVK13-1Q9NX77 482 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 MS4A12Q9NXJ0 267 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 QPCTLQ9NXS2 382 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 ASIC5Q9NY37 505 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 A6NL46 340 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 ASNA1O43681 348 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 TGFB1P01137 390 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 CTSAP10619 480 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 AZGP1P25311 298 aaKnown RBP13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 BDKRB1P46663 353 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 PFN3P60673 137 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 SNRPD1P62314 119 aaKnown RBP13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 STARD3Q14849 445 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 EXOC3L2Q2M3D2 409 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 TMPRSS11BQ86T26 416 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 TAGAPQ8N103 731 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 ELMOD1Q8N336 334 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 HERVK_113Q902F9 699 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 LSM7Q9UK45 103 aaKnown RBP13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 CCL26Q9Y258 94 aa13.92□□□□□ -0.18
SFSWAP-201ENST00000261674 FAM227AF5H4B4 570 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 CTDSP2O14595 271 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 KPNA5O15131 536 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 SCN2BO60939 215 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms