RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 DOHHQ9BU89 302 aa15.31■□□□□ 0.04
LMNB1-201ENST00000261366 GOLGA4Q13439 2230 aaKnown RBP15.31■□□□□ 0.04
LMNB1-201ENST00000261366 COL4A4P53420 1690 aaPredicted RBP15.31■□□□□ 0.04
LMNB1-201ENST00000261366 GLYATL1P3A0A0U1RQE8 302 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 SMLR1H3BR10 107 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 MEN1O00255 615 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 GCM2O75603 506 aaPredicted RBP15.3■□□□□ 0.04
LMNB1-201ENST00000261366 APOL3O95236 402 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 CLEC2LP0C7M8 214 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 BPIP17213 487 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 CD9P21926 228 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 CNR2P34972 360 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 HTR2BP41595 481 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 CSNK2BP67870 215 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 GLB1LQ6UWU2 654 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 GPR65Q8IYL9 337 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 DNAJB8Q8NHS0 232 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 CEP295NLQ96MC4 621 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 DUSP26Q9BV47 211 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 GPR62Q9BZJ7 368 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 TBKBP1A7MCY6 615 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 CENPBD1B2RD01 187 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 ERVH48-1M5A8F1 160 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 SMAD6O43541 496 aaKnown RBP15.3■□□□□ 0.04
LMNB1-201ENST00000261366 MRPS14O60783 128 aaKnown RBP15.3■□□□□ 0.04
LMNB1-201ENST00000261366 SCN2BO60939 215 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 CYP2A7P20853 494 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 PRPS1L1P21108 318 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 ACRV1P26436 265 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 MAPK1P28482 360 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 CCR7P32248 378 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 ATP5C1P36542 298 aaKnown RBP15.3■□□□□ 0.04
LMNB1-201ENST00000261366 FLT3LGP49771 235 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 FBXO43Q4G163 708 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 ERICH5Q6P6B1 374 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 CERS6Q6ZMG9 384 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 ATCAYQ86WG3 371 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 TBC1D20Q96BZ9 403 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 FAM193BQ96PV7 902 aaPredicted RBP15.3■□□□□ 0.04
LMNB1-201ENST00000261366 SLC29A3Q9BZD2 475 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 ASIC5Q9NY37 505 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 CRNNQ9UBG3 495 aaPredicted RBP15.3■□□□□ 0.04
LMNB1-201ENST00000261366 A3GALT2U3KPV4 340 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 CCDC88CQ9P219 2028 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 GNG14A0A1W2PPG7 69 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 PRAMEF25A6NGN4 478 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 H7C0S8 307 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 IGHA2P01877 340 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 HIST1H2AGP0C0S8 130 aaPredicted RBP15.3■□□□□ 0.04
LMNB1-201ENST00000261366 HIST1H2ADP20671 130 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 TIE1P35590 1138 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 OLR1P78380 273 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 ACSM2AQ08AH3 577 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 RGNQ15493 299 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 CEP78Q5JTW2 689 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 LIPKQ5VXJ0 399 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 ACSM2BQ68CK6 577 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 SYNPOQ8N3V7 929 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 AQP11Q8NBQ7 271 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 JPH3Q8WXH2 748 aaPredicted RBP15.3■□□□□ 0.04
LMNB1-201ENST00000261366 FUBP3Q96I24 572 aaKnown RBP eCLIP15.3■□□□□ 0.043e-8■■■□□ 16.8
LMNB1-201ENST00000261366 HIST1H2AHQ96KK5 128 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 HIST1H2AJQ99878 128 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 H2AFJQ9BTM1 129 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 CD84Q9UIB8 345 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 MAP4K5Q9Y4K4 846 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 V9GYH0 126 aa15.3■□□□□ 0.04
LMNB1-201ENST00000261366 PCM1Q15154 2024 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 CCDC182A6NF36 153 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 GABRR3A8MPY1 467 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 TMEM229AB2RXF0 380 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 EIF3FO00303 357 aaPredicted RBP15.29■□□□□ 0.04
LMNB1-201ENST00000261366 SAP18O00422 153 aaKnown RBP15.29■□□□□ 0.04
LMNB1-201ENST00000261366 TMCC2O75069 709 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 ZNF623O75123 536 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 CLDN11O75508 207 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 OAZ2O95190 189 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 ASGR1P07306 291 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 RPL17P18621 184 aaKnown RBP15.29■□□□□ 0.04
LMNB1-201ENST00000261366 HNF1BP35680 557 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 IRF8Q02556 426 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 UBE3AQ05086 875 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 RUNX1T1Q06455 604 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 XKR6Q5GH73 641 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 NOXA1Q86UR1 476 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 C11orf74Q86VG3 221 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 LMNTD1Q8N9Z9 388 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 OR4A15Q8NGL6 344 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 NFKBIDQ8NI38 313 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 MED8Q96G25 268 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 P2RY13Q9BPV8 354 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 TMEM39AQ9NV64 488 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 PCDHB11Q9Y5F2 797 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 MN1Q10571 1320 aaPredicted RBP15.29■□□□□ 0.04
LMNB1-201ENST00000261366 ENTPD6O75354 484 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 CCNB2O95067 398 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 ALX3O95076 343 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 CYP17A1P05093 508 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 WEE1P30291 646 aa15.29■□□□□ 0.04
LMNB1-201ENST00000261366 GNG2P59768 71 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms