RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SLC9A6Q92581 669 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 FBXL8Q96CD0 374 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 INSM2Q96T92 566 aaPredicted RBP8.73□□□□□ -1.01
CKAP2-201ENST00000258607 TTTY10Q9BZA0 68 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 C11orf16Q9NQ32 467 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 TAS2R16Q9NYV7 291 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 ZIM2Q9NZV7 527 aa8.73□□□□□ -1.01
CKAP2-201ENST00000258607 MDC1Q14676 2089 aaKnown RBP8.73□□□□□ -1.01
CKAP2-201ENST00000258607 TCRBV21S2A2A0A5A6 115 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 TCRBV3S1A0A5B6 114 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 A6NHS1 94 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 BBIP1A8MTZ0 92 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 KPNA4O00629 521 aaPredicted RBP8.72□□□□□ -1.01
CKAP2-201ENST00000258607 SPINT1O43278 529 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 HNRNPRO43390 633 aaKnown RBP8.72□□□□□ -1.01
CKAP2-201ENST00000258607 EFEMP2O95967 443 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 CH25HO95992 272 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 ENO2P09104 434 aaPredicted RBP8.72□□□□□ -1.01
CKAP2-201ENST00000258607 COL9A1P20849 921 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 ESRRGP62508 458 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 SNRPNP63162 240 aaKnown RBP8.72□□□□□ -1.01
CKAP2-201ENST00000258607 ERV3-1Q14264 604 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 TPRG1LQ5T0D9 272 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 ACBD5Q5T8D3 534 aaPredicted RBP8.72□□□□□ -1.01
CKAP2-201ENST00000258607 KCTD8Q6ZWB6 473 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 LCN9Q8WX39 176 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 BBS4Q96RK4 519 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 C9orf16Q9BUW7 83 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 ZCCHC2Q9C0B9 1178 aaKnown RBP8.72□□□□□ -1.01
CKAP2-201ENST00000258607 RDH14Q9HBH5 336 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 RPL26L1Q9UNX3 145 aaKnown RBP8.72□□□□□ -1.01
CKAP2-201ENST00000258607 PCDHGA11Q9Y5H2 935 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 TRBV5-4A0A0C4DH59 114 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 SLC35F4A4IF30 521 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 A8MU76 341 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 JUPP14923 745 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 ZNF30P17039 623 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 CD9P21926 228 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 ARSFP54793 590 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 SIM1P81133 766 aaPredicted RBP8.72□□□□□ -1.01
CKAP2-201ENST00000258607 ELP6Q0PNE2 266 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 CLCA4Q14CN2 919 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 ITPRIPL2Q3MIP1 535 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 PDCD4Q53EL6 469 aaKnown RBP8.72□□□□□ -1.01
CKAP2-201ENST00000258607 LYPLAL1Q5VWZ2 237 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 B3GLCTQ6Y288 498 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 DSG4Q86SJ6 1040 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 EID3Q8N140 333 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 ZNF555Q8NEP9 628 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 VOPP1Q96AW1 172 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 RAD51AP1Q96B01 352 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 CPEB1Q9BZB8 566 aaKnown RBP8.72□□□□□ -1.01
CKAP2-201ENST00000258607 SLC6A16Q9GZN6 736 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 IL21RQ9HBE5 538 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 GIN1Q9NXP7 522 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 HCN2Q9UL51 889 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 A0A1W2PRB8 838 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 H3BSH0 61 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 NUAK1O60285 661 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 RNGTTO60942 597 aaKnown RBP8.72□□□□□ -1.01
CKAP2-201ENST00000258607 PRSS23O95084 383 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 SOD1P00441 154 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 THRBP10828 461 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 TNNI3P19429 210 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 TAS2R38P59533 333 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 RPL26P61254 145 aaKnown RBP8.72□□□□□ -1.01
CKAP2-201ENST00000258607 GALNT1Q10472 559 aaPredicted RBP8.72□□□□□ -1.01
CKAP2-201ENST00000258607 HYAL1Q12794 435 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 BNIP2Q12982 314 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 BNIP3Q12983 259 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 GPAT3Q53EU6 434 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 TMEM196Q5HYL7 178 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 CLEC12AQ5QGZ9 265 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 CEACAM20Q6UY09 585 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 R3HCC1LQ7Z5L2 792 aaKnown RBP8.72□□□□□ -1.01
CKAP2-201ENST00000258607 TECPR1Q7Z6L1 1165 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 FBXL6Q8N531 539 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 CXorf40BQ96DE9 158 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 GPATCH1Q9BRR8 931 aaKnown RBP8.72□□□□□ -1.01
CKAP2-201ENST00000258607 GPR174Q9BXC1 333 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 EXOSC4Q9NPD3 245 aaKnown RBP8.72□□□□□ -1.01
CKAP2-201ENST00000258607 RLIMQ9NVW2 624 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 DOLKQ9UPQ8 538 aa8.72□□□□□ -1.01
CKAP2-201ENST00000258607 SPTAN1Q13813 2472 aaKnown RBP8.71□□□□□ -1.01
CKAP2-201ENST00000258607 CLDN24A6NM45 220 aa8.71□□□□□ -1.01
CKAP2-201ENST00000258607 ANKRD28O15084 1053 aa8.71□□□□□ -1.01
CKAP2-201ENST00000258607 MAGEB3O15480 346 aa8.71□□□□□ -1.01
CKAP2-201ENST00000258607 ZNF182P17025 639 aaPredicted RBP8.71□□□□□ -1.01
CKAP2-201ENST00000258607 CERS1P27544 350 aa8.71□□□□□ -1.01
CKAP2-201ENST00000258607 CLCN2P51788 898 aa8.71□□□□□ -1.01
CKAP2-201ENST00000258607 LTB4RQ15722 352 aa8.71□□□□□ -1.01
CKAP2-201ENST00000258607 C18orf63Q68DL7 685 aa8.71□□□□□ -1.01
CKAP2-201ENST00000258607 PNCKQ6P2M8 343 aa8.71□□□□□ -1.01
CKAP2-201ENST00000258607 DPPA4Q7L190 304 aa8.71□□□□□ -1.01
CKAP2-201ENST00000258607 PIWIL3Q7Z3Z3 882 aaKnown RBP8.71□□□□□ -1.01
CKAP2-201ENST00000258607 GPR141Q7Z602 305 aa8.71□□□□□ -1.01
CKAP2-201ENST00000258607 FAM217AQ8IXS0 508 aa8.71□□□□□ -1.01
CKAP2-201ENST00000258607 THAP11Q96EK4 314 aa8.71□□□□□ -1.01
CKAP2-201ENST00000258607 COL21A1Q96P44 957 aa8.71□□□□□ -1.01
CKAP2-201ENST00000258607 SLC17A9Q9BYT1 436 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms