RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 NXPE4Q6UWF7 544 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 Q6ZPB1 254 aaPredicted RBP16.67■□□□□ 0.26
LRFN3-201ENST00000246529 CCDC71Q8IV32 467 aaPredicted RBP16.67■□□□□ 0.26
LRFN3-201ENST00000246529 PARP8Q8N3A8 854 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 CPA6Q8N4T0 437 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 SPPL2AQ8TCT8 520 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 FKBP10Q96AY3 582 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 METTL2AQ96IZ6 378 aaKnown RBP16.67■□□□□ 0.26
LRFN3-201ENST00000246529 SLC35A5Q9BS91 424 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 ZDHHC5Q9C0B5 715 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 ZCCHC2Q9C0B9 1178 aaKnown RBP16.67■□□□□ 0.26
LRFN3-201ENST00000246529 TRIM39Q9HCM9 518 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 SPASTQ9UBP0 616 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 RNASET2O00584 256 aaKnown RBP16.67■□□□□ 0.26
LRFN3-201ENST00000246529 RRM2P31350 389 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 OR1E2P47887 323 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 PNLIPRP1P54315 467 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 TMED1Q13445 227 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 IL18R1Q13478 541 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 FAM78AQ5JUQ0 283 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 SLC16A12Q6ZSM3 486 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 LAS2Q8IYD9 372 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 C16orf78Q8WTQ4 265 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 SMG7Q92540 1137 aaKnown RBP16.67■□□□□ 0.26
LRFN3-201ENST00000246529 REPS1Q96D71 796 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 EFCAB11Q9BUY7 163 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 ATP6V1HQ9UI12 483 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 ASF1AQ9Y294 204 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 TDRKHQ9Y2W6 561 aaKnown RBP16.67■□□□□ 0.26
LRFN3-201ENST00000246529 TESMINQ9Y4I5 508 aa16.67■□□□□ 0.26
LRFN3-201ENST00000246529 TCF20Q9UGU0 1960 aaKnown RBP16.67■□□□□ 0.26
LRFN3-201ENST00000246529 FURINP09958 794 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 TFPTP0C1Z6 253 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 ACADLP28330 430 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 PCGF2P35227 344 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 MAPK9P45984 424 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 VASPP50552 380 aaPredicted RBP16.66■□□□□ 0.26
LRFN3-201ENST00000246529 FOXD4Q12950 439 aaPredicted RBP16.66■□□□□ 0.26
LRFN3-201ENST00000246529 C11orf96Q7Z7L8 435 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 ADGRD2Q7Z7M1 963 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 FBXO15Q8NCQ5 510 aaPredicted RBP16.66■□□□□ 0.26
LRFN3-201ENST00000246529 RAB2BQ8WUD1 216 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 FAR1Q8WVX9 515 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 BHLHE41Q9C0J9 482 aaPredicted RBP16.66■□□□□ 0.26
LRFN3-201ENST00000246529 RUBCNLQ9H714 662 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 CCDC177Q9NQR7 707 aaPredicted RBP16.66■□□□□ 0.26
LRFN3-201ENST00000246529 TM7SF3Q9NS93 570 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 ADPRHL2Q9NX46 363 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 DEC1Q9P2X7 70 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 ZNF282Q9UDV7 671 aaPredicted RBP16.66■□□□□ 0.26
LRFN3-201ENST00000246529 SLC23A2Q9UGH3 650 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 NAALAD2Q9Y3Q0 740 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 MAP4K5Q9Y4K4 846 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 JRKO75564 520 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 CCDC159P0C7I6 412 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 CD6P30203 668 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 FPGSQ05932 587 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 VN1R5Q7Z5H4 357 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 C11orf65Q8NCR3 313 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 TMIEQ8NEW7 156 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 PPCDCQ96CD2 204 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 WDR34Q96EX3 536 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 MAGED4Q96JG8 741 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 GALNT8Q9NY28 637 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 PSME2Q9UL46 239 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 LRRK1Q38SD2 2015 aa16.66■□□□□ 0.26
LRFN3-201ENST00000246529 EDDM13A0A1B0GTR0 161 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 SOBPA7XYQ1 873 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 FOXE1O00358 373 aaPredicted RBP16.65■□□□□ 0.26
LRFN3-201ENST00000246529 BCL10O95999 233 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 ELP6Q0PNE2 266 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 ELAVL3Q14576 367 aaKnown RBP16.65■□□□□ 0.26
LRFN3-201ENST00000246529 NPTX1Q15818 432 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 HIST2H2ACQ16777 129 aaPredicted RBP16.65■□□□□ 0.26
LRFN3-201ENST00000246529 PAGE2BQ5JRK9 111 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 HIST2H2AA3Q6FI13 130 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 PIWIL3Q7Z3Z3 882 aaKnown RBP16.65■□□□□ 0.26
LRFN3-201ENST00000246529 FAM124AQ86V42 546 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 SETD9Q8NE22 299 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 OR52J3Q8NH60 311 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 NFKBIDQ8NI38 313 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 DOHHQ9BU89 302 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 NDRG4Q9ULP0 352 aaKnown RBP16.65■□□□□ 0.26
LRFN3-201ENST00000246529 BCAS1O75363 584 aaPredicted RBP16.65■□□□□ 0.26
LRFN3-201ENST00000246529 C9P02748 559 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 IL3P08700 152 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 CYP4F2P78329 520 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 PPIGQ13427 754 aaKnown RBP eCLIP16.65■□□□□ 0.26
LRFN3-201ENST00000246529 KEAP1Q14145 624 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 FAHD1Q6P587 224 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 CCDC81Q6ZN84 652 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 RTL10Q7L3V2 364 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 OR2L2Q8NH16 312 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 FAM81AQ8TBF8 368 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 ZNF566Q969W8 418 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 NDUFAF4Q9P032 175 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 PCDHGA10Q9Y5H3 936 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 PCM1Q15154 2024 aa16.65■□□□□ 0.26
LRFN3-201ENST00000246529 TNFRSF21O75509 655 aa16.64■□□□□ 0.25
LRFN3-201ENST00000246529 INHBBP09529 407 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms